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Cell Cycle-specific Measurement of γH2AX and Apoptosis After Genotoxic Stress by Flow Cytometry
Published on: September 1, 2019
The interplay between DNA damage and autophagy in lung cancer: A mathematical study
Dipanka Tanu Sarmah1, Nandadulal Bairagi2, Samrat Chatterjee1
1Complex Analysis Group, Translational Health Science and Technology Institute, NCR Biotech Science Cluster, Faridabad, 121001, India.
Abstract:
The rising mortality in lung cancer, as well as the constraints of the existing drugs, have made it a major research topic. DNA damage marks the early onset of cancer as it often results from vulnerabilities due to UV rays, oxidative stress, ionizing radiation, and various types of genotoxic attacks. p53 plays an unequivocal role in the DNA repair process and has an abiding presence at the crossroads of the pathways linking DNA damage and cancer. p53 also regulates autophagy in a dual manner based on its cellular localization. The plexus of autophagy regulated by p53 includes AMPK and BCL2, which are positive and negative regulators of prime autophagy inducer beclin1, respectively. Although autophagy is a quintessential process, its levels need to be monitored as uncontrolled autophagy may lead to cell death. The association of p53 and autophagic cell death is very vital as the former acts whenever any threat comes to DNA while the latter may play a role in getting rid of the culprit cell. Therefore, in this paper, we have formulated a seven-dimensional mathematical model connecting p53, DNA damage, and autophagy in lung cancer. We performed both local and global sensitivity analysis along with parameter recalibration analysis to understand the system dynamics. We hypothesized that, by the modulation of beclin1 level, the regulation of AMPK and BCL2 could be a possible strategy to mitigate the progression of lung cancer.
Insights
This study models the interplay between p53, DNA damage, and autophagy in lung cancer. Modulating beclin1 levels via AMPK and BCL2 may offer a strategy to combat lung cancer progression.
Area of Science:
- Oncology
- Molecular Biology
- Systems Biology
Background:
- Lung cancer mortality remains high, with existing treatments facing limitations.
- DNA damage, caused by various genotoxic agents, is an early event in cancer development.
- The tumor suppressor protein p53 is crucial for DNA repair and influences cancer progression and autophagy.
Purpose of the Study:
- To develop a mathematical model elucidating the relationship between p53, DNA damage, and autophagy in lung cancer.
- To investigate the dynamic interactions within this complex biological system.
- To identify potential therapeutic strategies for lung cancer based on modulating key regulatory pathways.
Main Methods:
- Formulation of a seven-dimensional mathematical model integrating p53, DNA damage, and autophagy.
- Implementation of local and global sensitivity analyses to understand system dynamics.
- Parameter recalibration analysis to refine model predictions.
Main Results:
- The model successfully captures the intricate connections between p53, DNA damage, and autophagy.
- Sensitivity analyses revealed critical parameters influencing the system's behavior.
- The study highlights the dual role of autophagy regulation by p53, involving AMPK and BCL2.
Conclusions:
- Modulating beclin1 levels, through the regulation of AMPK and BCL2, is proposed as a potential strategy to mitigate lung cancer progression.
- Understanding the p53-autophagy axis is vital for developing novel lung cancer therapies.
- Mathematical modeling provides valuable insights into complex cancer biology and therapeutic interventions.
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