Related Experiment Video
Updated: Nov 3, 2025

Yeast As a Chassis for Developing Functional Assays to Study Human P53
Published on: August 4, 2019
Rely on Each Other: DNA Binding Cooperativity Shapes p53 Functions in Tumor Suppression and Cancer Therapy
Oleg Timofeev1, Thorsten Stiewe1
1Institute of Molecular Oncology, Universities of Giessen and Marburg Lung Center (UGMLC), Member of the German Center for Lung Research (DZL), Philipps-University, 35037 Marburg, Germany.
Abstract:
p53 is a tumor suppressor that is mutated in half of all cancers. The high clinical relevance has made p53 a model transcription factor for delineating general mechanisms of transcriptional regulation. p53 forms tetramers that bind DNA in a highly cooperative manner. The DNA binding cooperativity of p53 has been studied by structural and molecular biologists as well as clinical oncologists. These experiments have revealed the structural basis for cooperative DNA binding and its impact on sequence specificity and target gene spectrum. Cooperativity was found to be critical for the control of p53-mediated cell fate decisions and tumor suppression. Importantly, an estimated number of 34,000 cancer patients per year world-wide have mutations of the amino acids mediating cooperativity, and knock-in mouse models have confirmed such mutations to be tumorigenic. While p53 cancer mutations are classically subdivided into "contact" and "structural" mutations, "cooperativity" mutations form a mechanistically distinct third class that affect the quaternary structure but leave DNA contacting residues and the three-dimensional folding of the DNA-binding domain intact. In this review we discuss the concept of DNA binding cooperativity and highlight the unique nature of cooperativity mutations and their clinical implications for cancer therapy.
Insights
p53 protein
Area of Science:
- Molecular Biology
- Cancer Research
- Genetics
Background:
- p53 is a crucial tumor suppressor protein, frequently mutated in cancers.
- Its function as a transcription factor is vital for regulating cellular processes and preventing tumor formation.
- Understanding p53's DNA binding mechanism is key to cancer therapy.
Purpose of the Study:
- To review the concept of DNA binding cooperativity in p53.
- To highlight the distinct nature of p53 cooperativity mutations.
- To discuss the clinical implications of these mutations in cancer therapy.
Main Methods:
- Structural biology studies.
- Molecular biology experiments.
- Analysis of clinical cancer data and mouse models.
Main Results:
- p53 forms cooperative DNA-binding tetramers, essential for sequence specificity and target gene regulation.
- Cooperativity is critical for p53-mediated cell fate decisions and tumor suppression.
- A distinct class of 'cooperativity' mutations affects p53's quaternary structure, impacting its tumor-suppressive function.
Conclusions:
- Cooperativity mutations represent a unique class of p53 alterations with significant clinical relevance.
- These mutations, affecting approximately 34,000 cancer patients annually, are tumorigenic.
- Targeting cooperativity mechanisms offers potential new avenues for cancer treatment.
Related Concept Videos
Abnormal Proliferation
Covalently Linked Protein Regulators
These groups modify specific amino acids in a protein....
Cooperative Binding of Transcription Regulators
Cooperative Binding of Transcription Regulators
DNA Damage can Stall the Cell Cycle
Negative Regulator Molecules

