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Towards a priori uncertainty quantification in coarse-grained molecular dynamics: Generalized multipole potentials.
Paul N Patrone1, Andrew M Dienstfrey1, Geoffrey B McFadden1
1Applied and Computational Mathematics Division, National Institute of Standards and Technology, 100 Bureau Drive, Gaithersburg MD, 20899, USA.
This study introduces an analytical method for coarse-graining rigid-body systems, enabling accuracy assessment of reduced-order models without costly simulations. This approach aids in justifying computational materials science model development costs.
Area of Science:
- Computational Materials Science
- Molecular Dynamics Simulations
Background:
- Coarse-graining (CG) methods in computational materials science often lack upfront uncertainty quantification (UQ) tools.
- This absence hinders the adoption of CG techniques due to unknown model accuracy and calibration costs.
Purpose of the Study:
- To develop an analytical method for coarse-graining rigid-body systems.
- To provide a priori UQ for reduced-order models in CG molecular dynamics (MD).
- To establish a mathematical foundation for assessing CG force field quality without simulations.
Main Methods:
- Developed an analytical coarse-graining approach for rigid-body systems.
- Derived corresponding intermolecular potentials with controllable accuracy relative to atomistic models.
- Validated the method using simulated trajectories.
Main Results:
- The analytical method provides a mathematical basis for evaluating CG force field quality a priori.
- It allows understanding atomistic systems as limits of reduced-order models.
- Simulations confirmed the approach's validity at the trajectory level.
Conclusions:
- The presented method offers a way to assess CG model accuracy before extensive simulations.
- It addresses the need for UQ in coarse-grained molecular dynamics.
- Further work is needed for coarse-graining fully non-rigid systems.
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