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The Challenge of Choosing the Best Classification Method in Radiomic Analyses: Recommendations and Applications to
Federica Corso1,2,3, Giulia Tini1, Giuliana Lo Presti4
1Department of Experimental Oncology, IEO European Institute of Oncology IRCCS, via Adamello 16, 20139 Milan, Italy.
Cancers
|July 2, 2021
Summary
Machine learning algorithms significantly impact radiomics predictions. Tree-based classifiers like Random Forest and Extreme Gradient Boosting show robust performance for Non-Small-Cell Lung Cancer (NSCLC) lymph node status prediction, especially with adequate sample sizes.
Area of Science:
- Radiomics and Machine Learning in Medical Imaging
Background:
- Radiomics leverages high-dimensional imaging features for tumor characterization and outcome prediction.
- Algorithm selection critically influences radiomic analysis and predictive accuracy.
- Identifying optimal machine learning methods is essential for reliable radiomic applications.
Purpose of the Study:
- To identify suitable machine learning approaches for radiomic-based binary predictions.
- To evaluate the impact of sample size, outcome balancing, and feature-outcome association strength on prediction performance.
- To assess the effectiveness of various feature selection (FS) methods combined with classifiers.
Main Methods:
- Simulated data based on 168 radiomic features from CT scans of 270 Non-Small-Cell Lung Cancer (NSCLC) patients were used.
- Six classifiers were evaluated in combination with six FS methods.
- Performance metrics included Area Under the Receiver Operating Characteristics Curves (AUC), sensitivity, and specificity.
Main Results:
- Tree-based classifiers (Random Forest, Extreme Gradient Boosting) demonstrated strong performance (AUC ≥ 0.73) across various FS methods and association strengths.
- These classifiers offered the best balance between sensitivity and specificity.
- Performance was generally lower and more variable with small sample sizes.
- FS methods did not consistently improve classifier performance.
Conclusions:
- Random Forest and Extreme Gradient Boosting are recommended for radiomic binary predictions, particularly for NSCLC lymph node status.
- Careful consideration of sample size, outcome balancing, and feature-outcome association is crucial when selecting FS and classifiers in radiomic studies.

