FANCD2-Associated Nuclease 1 Partially Compensates for the Lack of Exonuclease 1 in Mismatch Repair
Katja Kratz1, Mariela Artola-Borán1, Saho Kobayashi-Era1,2
1Institute of Molecular Cancer Research, University of Zurichgrid.7400.3, Zurich, Switzerland.
Abstract:
Germline mutations in the mismatch repair (MMR) genes MSH2, MSH6, MLH1, and PMS2 are linked to cancer of the colon and other organs, characterized by microsatellite instability and a large increase in mutation frequency. Unexpectedly, mutations in EXO1, encoding the only exonuclease genetically implicated in MMR, are not linked to familial cancer and cause a substantially weaker mutator phenotype. This difference could be explained if eukaryotic cells possessed additional exonucleases redundant with EXO1. Analysis of the MLH1 interactome identified FANCD2-associated nuclease 1 (FAN1), a novel enzyme with biochemical properties resembling EXO1. We now show that FAN1 efficiently substitutes for EXO1 in MMR assays and that this functional complementation is modulated by its interaction with MLH1. FAN1 also contributes to MMR in vivo; cells lacking both EXO1 and FAN1 have an MMR defect and display resistance to N-methyl-N-nitrosourea (MNU) and 6-thioguanine (TG). Moreover, FAN1 loss amplifies the mutational profile of EXO1-deficient cells, suggesting that the two nucleases act redundantly in the same antimutagenic pathway. However, the increased drug resistance and mutator phenotype of FAN1/EXO1-deficient cells are less prominent than those seen in cells lacking MSH6 or MLH1. Eukaryotic cells thus apparently possess additional mechanisms that compensate for the loss of EXO1.
Insights
The DNA mismatch repair (MMR) pathway involves EXO1 and the newly identified FAN1 nuclease, which act redundantly to prevent mutations. Loss of both EXO1 and FAN1 causes a weaker mutator phenotype than mutations in MMR genes like MSH6.
Area of Science:
- Molecular Biology
- Genetics
- Cancer Research
Background:
- Germline mutations in mismatch repair (MMR) genes (MSH2, MSH6, MLH1, PMS2) are linked to hereditary cancers and microsatellite instability.
- Mutations in EXO1, the sole exonuclease implicated in MMR, do not cause familial cancer and exhibit a weaker mutator phenotype.
Purpose of the Study:
- To investigate potential functional redundancy with EXO1 in MMR.
- To identify novel nucleases involved in DNA repair pathways.
Main Methods:
- Analysis of the MLH1 interactome to identify interacting proteins.
- Biochemical assays to characterize FAN1's enzymatic properties and MMR activity.
- In vivo studies using cell lines deficient in EXO1 and FAN1 to assess MMR defects and drug resistance.
Main Results:
- FAN1 was identified as a novel enzyme with biochemical properties similar to EXO1.
- FAN1 efficiently substitutes for EXO1 in MMR assays, with its function modulated by MLH1 interaction.
- Cells lacking both EXO1 and FAN1 show MMR defects, resistance to MNU and TG, and an amplified mutational profile, indicating redundant roles in an antimutagenic pathway.
- The MMR defect in FAN1/EXO1-deficient cells is less severe than in MSH6 or MLH1 deficient cells.
Conclusions:
- Eukaryotic cells possess nucleases like FAN1 that provide functional redundancy with EXO1 in MMR.
- FAN1 and EXO1 act in a common antimutagenic pathway, but other compensatory mechanisms exist for EXO1 loss.
- The findings shed light on the complex mechanisms underlying DNA repair and genome stability.
Related Concept Videos
Mismatch Repair
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
Mismatch Repair
Nucleotide Excision Repair
Cells are regularly exposed to mutagens—factors in the environment that can damage DNA and generate mutations. UV radiation is one of the most common mutagens and is estimated to introduce a significant number of changes in DNA. These include bends or kinks in the structure, which can block DNA replication or transcription. If these errors are not fixed, the damage can cause mutations, which in turn can result in cancer or disease depending on which sequences are...
Nucleotide Excision Repair
Long-patch Base Excision Repair
Base Excision Repair
The first step of...


