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Published on: November 30, 2013
Gestational Low Protein Diet Modulation on miRNA Transcriptome and Its Target During Fetal and Breastfeeding
Letícia de Barros Sene1, Gabriela Leme Lamana2, Andre Schwambach Vieira3
1Department of Structural and Functional Biology, Institute of Biosciences, São Paulo State University (UNESP), Botucatu, Brazil.
Insights
Gestational protein restriction impairs kidney development, reducing nephron numbers. MicroRNA (miRNA) changes in low protein (LP) offspring kidneys reveal molecular pathways affecting kidney stem cells and differentiation during nephrogenesis.
Area of Science:
- Developmental Biology
- Nephrology
- Molecular Biology
Background:
- Gestational protein restriction significantly impacts kidney ontogenesis, leading to a 28% reduction in functional nephrons.
- Reduced nephron count is linked to hypertension and cardiovascular issues later in life, a common outcome in fetal programming models.
- This study investigates microRNAs (miRNAs) and molecular pathways involved in the reduced interaction between metanephric cap (CM) and ureteric bud (UB), and decreased nephron stem cells in low protein (LP) male fetal kidneys at 17 gestational days (17GD).
Purpose of the Study:
- To evaluate miRNA expression and predict target pathways in the kidneys of 21 gestational days (21GD) and 7 days of life (7DL) low protein (LP) offspring.
- To elucidate the molecular modulations occurring during nephrogenesis under conditions of maternal protein restriction.
- To understand the long-term effects of gestational protein restriction on kidney development and potential health risks.
Main Methods:
- Pregnant Wistar rats were fed either a regular protein (NP, 17%) or low protein (LP, 6%) diet.
- Kidney tissues from male offspring at 21 gestational days (21GD) and 7 days of life (7DL) underwent miRNA transcriptome sequencing (miRNA-Seq).
- Seven differentially expressed miRNAs related to proliferation, differentiation, and apoptosis were validated, and their target genes/proteins were investigated using RT-qPCR and immunohistochemistry.
Main Results:
- At 21GD, 21 miRNAs were differentially expressed in LP fetuses (12 upregulated, 9 downregulated). At 7DL, 74 miRNAs were differentially expressed (46 upregulated, 28 downregulated).
- mTOR signaling was identified as crucial in reducing nephron numbers from 17GD to 7DL in LP offspring. IGF1 and TGFβ pathways also showed similar patterns, modulated by specific miRNAs (e.g., 181a-5p, 181a-3p, 199a-5p).
- MiRNA 181c-3p influenced SIX2 and Notch1 reduction at 7DL. Enhanced Bax at 21GD was regulated by miRNA 298-5p. Pro-survival (Bcl2) and pro-apoptotic (Caspase-3) proteins were modulated by other miRNAs. Compensatory UB branching and a 32% increase in CM stem cells were observed at 21GD, alongside potential cell cycle arrest.
Conclusions:
- Maternal protein restriction induces significant miRNA dysregulation during kidney development, impacting key signaling pathways like mTOR, IGF1, and TGFβ.
- Compensatory mechanisms, including ureteric bud branching and increased metanephric cap stem cells, occur in fetal kidneys under low protein conditions.
- Later in development (7DL), altered miRNA expression persists, alongside activation of differentiation and progenitor cell consumption pathways, suggesting complex, stage-specific molecular adaptations to early-life nutritional stress.
Background:
The kidney ontogenesis is the most structurally affected by gestational protein restriction, reducing 28% of their functional units. The reduced nephron number is predictive of hypertension and cardiovascular dysfunctions that are generally observed in the adult age of most fetal programming models. We demonstrate miRNAs and predict molecular pathway changes associated with reduced reciprocal interaction between metanephros cap (CM) and ureter bud (UB) and a 28% decreased nephron stem cells in the 17 gestational days (17GD) low protein (LP) intake male fetal kidney. Here, we evaluated the same miRNAs and predicted targets in the kidneys of 21GD and at 7 days of life (7DL) LP offspring to elucidate the molecular modulations during nephrogenesis.
Methods:
Pregnant Wistar rats were allocated into two groups: NP (regular protein diet- 17%) or LP (diet-6%). miRNA transcriptome sequencing (miRNA-Seq) was performed on the MiSeq platform from 21GD and 7DL male offspring kidneys using previously described methods. Among the top 10 dysfunctional regulated miRNAs, we validated 7 related to proliferation, differentiation, and apoptosis processes and investigated predicted target genes and proteins by RT-qPCR and immunohistochemistry.
Results:
In 21GD, LP fetuses were identified alongside 21 differently expressed miRNAs, of which 12 were upregulated and 9 downregulated compared to age-matched NP offspring. In 7-DL LP offspring, the differentially expressed miRNAs were counted to be 74, of which 46 were upregulated and 28 downregulated. The curve from 17-GD to 7-DL shows that mTOR was fundamental in reducing the number of nephrons in fetal kidneys where the mothers were subjected to a protein restriction. IGF1 and TGFβ curves also seemed to present the same mTOR pattern and were modulated by miRNAs 181a-5p, 181a-3p, and 199a-5p. The miRNA 181c-3p modulated SIX2 and Notch1 reduction in 7-DL but not in terms of the enhanced expression of both in the 21-GD, suggesting the participation of an additional regulator. We found enhanced Bax in 21-GD; it was regulated by miRNA 298-5p, and Bcl2 and Caspase-3 were controlled by miRNA (by 7a-5p and not by the predicted 181a-5p). The miRNA 144-3p regulated BCL6, which was enhanced, as well as Zeb 1 and 2 induced by BCL6. These results revealed that in 21GD, the compensatory mechanisms in LP kidneys led to the activation of UB ramification. Besides, an increase of 32% in the CM stem cells and a possible cell cycle halt of renal progenitor cells, which remaining undifferentiated, were observed. In the 7DL, much more altered miRNA expression was found in LP kidneys, and this was probably due to an increased maternal diet content. Additionally, we verified the activation of pathways related to differentiation and consumption of progenitor cells.
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