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Published on: October 18, 2024
TSC2 regulates lysosome biogenesis via a non-canonical RAGC and TFEB-dependent mechanism
Nicola Alesi1, Elie W Akl1, Damir Khabibullin1
1Pulmonary and Critical Care Medicine, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Abstract:
Tuberous Sclerosis Complex (TSC) is caused by TSC1 or TSC2 mutations, resulting in hyperactivation of the mechanistic target of rapamycin complex 1 (mTORC1). Transcription factor EB (TFEB), a master regulator of lysosome biogenesis, is negatively regulated by mTORC1 through a RAG GTPase-dependent phosphorylation. Here we show that lysosomal biogenesis is increased in TSC-associated renal tumors, pulmonary lymphangioleiomyomatosis, kidneys from Tsc2+/- mice, and TSC1/2-deficient cells via a TFEB-dependent mechanism. Interestingly, in TSC1/2-deficient cells, TFEB is hypo-phosphorylated at mTORC1-dependent sites, indicating that mTORC1 is unable to phosphorylate TFEB in the absence of the TSC1/2 complex. Importantly, overexpression of folliculin (FLCN), a GTPase activating protein for RAGC, increases TFEB phosphorylation at the mTORC1 sites in TSC2-deficient cells. Overexpression of constitutively active RAGC is sufficient to relocalize TFEB to the cytoplasm. These findings establish the TSC proteins as critical regulators of lysosomal biogenesis via TFEB and RAGC and identify TFEB as a driver of the proliferation of TSC2-deficient cells.
Insights
Tuberous Sclerosis Complex (TSC) involves mutations in TSC1/TSC2, leading to increased lysosomal biogenesis driven by Transcription Factor EB (TFEB). This study reveals TSC proteins regulate TFEB and RAGC, impacting cell proliferation.
Area of Science:
- Cell Biology
- Genetics
- Biochemistry
Background:
- Tuberous Sclerosis Complex (TSC) is a genetic disorder caused by mutations in TSC1 or TSC2 genes.
- These mutations lead to the hyperactivation of the mechanistic target of rapamycin complex 1 (mTORC1) signaling pathway.
- Transcription Factor EB (TFEB) is a key regulator of lysosome biogenesis and is negatively controlled by mTORC1 through phosphorylation.
Purpose of the Study:
- To investigate the role of TSC proteins in regulating lysosomal biogenesis.
- To elucidate the mechanism by which TSC mutations affect TFEB activity.
- To identify TFEB as a potential driver of cell proliferation in TSC.
Main Methods:
- Analysis of lysosomal biogenesis in TSC-associated tissues and cells.
- Assessment of TFEB phosphorylation status in TSC1/2-deficient cells.
- Investigating the effect of folliculin (FLCN) and constitutively active RAGC on TFEB phosphorylation and localization.
Main Results:
- Lysosomal biogenesis is elevated in TSC-associated renal tumors, pulmonary lymphangioleiomyomatosis, and Tsc2+/- mouse kidneys.
- TFEB is hypo-phosphorylated at mTORC1-dependent sites in TSC1/2-deficient cells.
- Overexpression of FLCN increases TFEB phosphorylation, while active RAGC causes TFEB cytoplasmic relocalization.
Conclusions:
- TSC proteins are critical regulators of lysosomal biogenesis through the TFEB and RAGC pathways.
- TFEB is identified as a driver of proliferation in TSC2-deficient cells.
- This provides new insights into the molecular mechanisms underlying TSC pathogenesis.
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