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Updated: Oct 28, 2025

Computation of Atmospheric Concentrations of Molecular Clusters from ab initio Thermochemistry
Published on: April 8, 2020
Parametric Sensitivity in a Generalized Model for Atmospheric Pressure Chemical Ionization Reactions
Elie Lattouf1, Osmo Anttalainen1, Tapio Kotiaho2,3
1VERIFIN, Finnish Institute for Verification of the Chemical Weapons Convention, Department of Chemistry, University of Helsinki, FI-00014 Helsinki, Finland.
Abstract:
Gas phase reactions between hydrated protons H+(H2O) and a substance M, as seen in atmospheric pressure chemical ionization (APCI) with mass spectrometry (MS) and ion mobility spectrometry (IMS), were modeled computationally using initial amounts of [M] and [H+(H2O)], rate constants k1 to form protonated monomer (MH+(H2O)) and k2 to form proton bound dimer (M2H+(H2O)), and diffusion constants. At 1 × 1010 cm-3 (0.4 ppb) for [H+(H2O)] and vapor concentrations for M from 10 ppb to 10 ppm, a maximum signal was reached at 4.5 μs to 4.6 ms for MH+(H2O) and 7.8 μs to 46 ms for M2H+(H2O). Maximum yield for protonated monomer for a reaction time of 1 ms was ∼40% for k1 from 10-11 to 10-8 cm3·s-1, for k2/k1 = 0.8, and specific values of [M]. This model demonstrates that ion distributions could be shifted from [M2H+(H2O)] to [MH+(H2O)] using excessive levels of [H+(H2O)], even for [M] > 10 ppb, as commonly found in APCI MS and IMS measurements. Ion losses by collisions on surfaces were insignificant with losses of <0.5% for protonated monomer and <0.1% for proton bound dimer of dimethyl methylphosphonate (DMMP) at 5 ms. In this model, ion production in an APCI environment is treated over ranges of parameters important in mass spectrometric measurements. The models establish a foundation for detailed computations on response with mixtures of neutral substances.
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