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SAMPL7 physical property prediction from EC-RISM theory
Nicolas Tielker1, Stefan Güssregen2, Stefan M Kast3
1Physikalische Chemie III, Technische Universität Dortmund, Otto-Hahn-Str. 4a, 44227, Dortmund, Germany.
The embedded cluster reference interaction site model (EC-RISM) accurately predicted acidity constants (pKa) but showed limitations in predicting octanol-water partition coefficients (log P). Further optimization is needed for robust log P predictions in computational chemistry.
Area of Science:
- Computational Chemistry
- Physical Organic Chemistry
- Chemical Thermodynamics
Background:
- The embedded cluster reference interaction site model (EC-RISM) combines quantum mechanics with 3D RISM theory for predicting species in solution.
- This method was successfully applied to acidity constants (pKa) and octanol-water partition coefficients (log P) in previous SAMPL challenges (SAMPL6.1 and SAMPL6.2).
Purpose of the Study:
- To apply the EC-RISM methodology to predict aqueous pKa and octanol-water log P values for the SAMPL7 physical property challenge.
- To compute distribution coefficients (log D7.4) using predicted pKa and log P data.
- To evaluate the performance and identify areas for improvement in the EC-RISM model for these physical properties.
Main Methods:
- Utilized the embedded cluster reference interaction site model (EC-RISM) for quantum-mechanical calculations and 3D RISM theory.
- Applied the methodology to predict pKa and log P values for the SAMPL7 challenge.
- Calculated log D7.4 values by combining independent pKa and log P predictions.
Main Results:
- Macroscopic pKa predictions showed excellent agreement with experimental data (RMSE = 0.72 pK units).
- Log P predictions exhibited a higher RMSE (1.84), falling short of expectations from previous challenges.
- Log D7.4 predictions were reasonable (RMSE = 1.69), benefiting from the combination of independent calculations.
Conclusions:
- The EC-RISM model demonstrates strong predictive power for aqueous pKa values.
- Further refinement of the EC-RISM model is necessary to improve the accuracy and robustness of octanol-water partition coefficient (log P) predictions.
- Continued efforts are needed to align computational model descriptions with experimental conditions for enhanced predictive accuracy in physical property challenges.
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