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OB-Folds and Genome Maintenance: Targeting Protein-DNA Interactions for Cancer Therapy
Sui Par1, Sofia Vaides1, Pamela S VanderVere-Carozza2
1Indiana University Comprehensive Cancer Center, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Abstract:
Genome stability and maintenance pathways along with their requisite proteins are critical for the accurate duplication of genetic material, mutation avoidance, and suppression of human diseases including cancer. Many of these proteins participate in these pathways by binding directly to DNA, and a subset employ oligonucleotide/oligosaccharide binding folds (OB-fold) to facilitate the protein-DNA interactions. OB-fold motifs allow for sequence independent binding to single-stranded DNA (ssDNA) and can serve to position specific proteins at specific DNA structures and then, via protein-protein interaction motifs, assemble the machinery to catalyze the replication, repair, or recombination of DNA. This review provides an overview of the OB-fold structural organization of some of the most relevant OB-fold containing proteins for oncology and drug discovery. We discuss their individual roles in DNA metabolism, progress toward drugging these motifs and their utility as potential cancer therapeutics. While protein-DNA interactions were initially thought to be undruggable, recent reports of success with molecules targeting OB-fold containing proteins suggest otherwise. The potential for the development of agents targeting OB-folds is in its infancy, but if successful, would expand the opportunities to impinge on genome stability and maintenance pathways for more effective cancer treatment.
Insights
Oligonucleotide/oligosaccharide binding folds (OB-folds) are crucial for DNA binding proteins involved in genome stability and cancer. Targeting these OB-fold proteins shows promise for novel cancer therapeutics.
Area of Science:
- Molecular Biology
- Structural Biology
- Oncology
Background:
- Genome stability pathways are essential for preventing mutations and diseases like cancer.
- Many DNA-binding proteins utilize oligonucleotide/oligosaccharide binding folds (OB-folds) for DNA interaction.
- OB-folds mediate sequence-independent binding to single-stranded DNA (ssDNA), positioning proteins for DNA metabolism.
Purpose of the Study:
- To review the structural organization of OB-fold proteins relevant to oncology.
- To discuss their roles in DNA metabolism and potential as cancer drug targets.
- To explore the progress and utility of targeting OB-folds in cancer therapy.
Main Methods:
- Literature review focusing on OB-fold containing proteins in DNA metabolism.
- Analysis of structural features of OB-fold motifs.
- Discussion of current research on drugging OB-fold proteins for cancer treatment.
Main Results:
- OB-fold motifs are key structural elements for DNA binding in proteins critical for genome maintenance.
- Several OB-fold proteins are implicated in cancer development and progression.
- Emerging strategies are targeting OB-fold containing proteins for therapeutic intervention.
Conclusions:
- Targeting OB-fold proteins represents a developing frontier in cancer drug discovery.
- Successful agents could offer new avenues for cancer treatment by modulating genome stability pathways.
- Despite initial challenges, targeting protein-DNA interactions via OB-folds is increasingly feasible.
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