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Published on: February 14, 2022
Antimicrobial susceptibility testing by measuring bacterial oxygen consumption on an integrated platform
Yang Liu1, Thomas Lehnert1, Torsten Mayr2
1Laboratory of Microsystems, Ecole Polytechnique Fédérale de Lausanne, CH-1015 Lausanne, Switzerland. martin.gijs@epfl.ch.
This study uses bacterial oxygen consumption rate (OCR) to rapidly test antibiotic effectiveness against bacteria like E. coli. This method quickly determines minimum inhibitory concentrations, aiding the fight against antimicrobial resistance.
Area of Science:
- Microbiology
- Biochemistry
- Antimicrobial Resistance
Background:
- Cellular respiration, indicated by oxygen consumption, is vital for bacterial metabolism.
- Antimicrobial resistance is a growing global health concern requiring novel diagnostic approaches.
Purpose of the Study:
- To evaluate bacterial oxygen consumption rate (OCR) as a phenotypic indicator for antimicrobial susceptibility testing.
- To rapidly determine minimum inhibitory concentrations (MICs) for antibiotics against E. coli.
Main Methods:
- Utilized photoluminescence-based oxygen sensing in a microchamber format for reduced sample volumes.
- Measured bacterial oxygen consumption rate (OCR) variations upon antibiotic exposure.
- Employed OCR modeling based on exponential bacterial growth to estimate bacterial doubling time.
- Correlated metabolic heat production data from nanocalorimetry with OCR measurements.
Main Results:
- Demonstrated systematic OCR variations in response to antibiotics, enabling rapid MIC determination.
- Successfully determined MICs for ampicillin, ciprofloxacin, and gentamicin within hours.
- Estimated bacterial doubling times under various culture conditions.
- Gained insights into microbial metabolic state and activity by correlating OCR and heat production.
Conclusions:
- Bacterial oxygen consumption rate (OCR) is a viable phenotypic indicator for rapid antimicrobial susceptibility testing.
- This microchamber-based approach offers a faster and more comprehensive method for microbiological studies.
- The integrated system provides deeper insights into microbial metabolic activity and antibiotic response.
Related Concept Videos
Oxygen Requirements and Growth Patterns
Microbial Growth Measurement: Direct Methods
Microbial Growth Measurement: Indirect Methods
Antimicrobial Effectiveness

