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Analysis-rcs-data: Open-Source Toolbox for the Ingestion, Time-Alignment, and Visualization of Sense and Stimulation
Kristin K Sellers1, Ro'ee Gilron1, Juan Anso1
1Department of Neurological Surgery, University of California, San Francisco, San Francisco, CA, United States.
This study introduces an open-source MATLAB toolbox to process data from the Medtronic Summit RC+S system. It standardizes neural recordings for advanced analysis, accelerating research in adaptive neurostimulation.
Area of Science:
- Neuroscience
- Biomedical Engineering
- Computational Neuroscience
Background:
- Closed-loop neurostimulation is a rapidly advancing therapy for neurological and psychiatric disorders.
- Chronic implantation of bidirectional devices like the Medtronic Summit RC+S system generates complex neural data.
- Optimizing neurostimulation requires offline analysis of recorded neural data to refine sensing and stimulation parameters.
Purpose of the Study:
- To develop an open-source toolbox for processing raw data from the Medtronic Summit RC+S system.
- To facilitate time-frequency analyses and modeling of neural data for therapeutic optimization.
- To accelerate research and clinical translation of adaptive neurostimulation.
Main Methods:
- Development of a MATLAB-based open-source toolbox.
- Implementation of data conversion, parsing, and time reconstruction functionalities.
- Inclusion of a plotting tool for visualizing multi-stream data and device settings.
- Integration of an analysis module for replicating on-board power computations.
Main Results:
- The toolbox transforms raw Summit RC+S files into a standardized format suitable for conventional neuroscientific analyses.
- A plotting tool aids in visualizing complex data streams and device parameters.
- An analysis module enables accelerated biomarker discovery through power computation replication.
Conclusions:
- The developed toolbox standardizes complex neural data, making it accessible for advanced analysis.
- This resource is expected to accelerate research and clinical applications of closed-loop neurostimulation.
- The toolbox supports the advancement of adaptive neurostimulation for patients with neurological and psychiatric conditions.
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