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Reconstitution of Cell-cycle Oscillations in Microemulsions of Cell-free Xenopus Egg Extracts
Published on: September 27, 2018
Balanced truncation for model reduction of biological oscillators
Alberto Padoan1, Fulvio Forni2, Rodolphe Sepulchre2
1Department of Engineering, University of Cambridge, Cambridge, UK. alberto.padoan.3@gmail.com.
Abstract:
Model reduction is a central problem in mathematical biology. Reduced order models enable modeling of a biological system at different levels of complexity and the quantitative analysis of its properties, like sensitivity to parameter variations and resilience to exogenous perturbations. However, available model reduction methods often fail to capture a diverse range of nonlinear behaviors observed in biology, such as multistability and limit cycle oscillations. The paper addresses this need using differential analysis. This approach leads to a nonlinear enhancement of classical balanced truncation for biological systems whose behavior is not restricted to the stability of a single equilibrium. Numerical results suggest that the proposed framework may be relevant to the approximation of classical models of biological systems.
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