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Updated: Oct 23, 2025

A Method for Targeted 16S Sequencing of Human Milk Samples
Published on: March 23, 2018
"A2 milk" authentication using isoelectric focusing and different PCR techniques.
Helmut K Mayer1, Kathrin Lenz1, Eva-Maria Halbauer1
1Department of Food Science and Technology, Food Chemistry Laboratory, BOKU - University of Natural Resources and Life Sciences Vienna, Muthgasse 11, A-1190 Vienna, Austria.
The study developed reliable PCR methods to identify beta-casein genetic variants A1 and A2. These methods are crucial for authenticating "A2 milk" and preventing consumer fraud due to unexpected A1 variant presence.
Area of Science:
- Animal Genetics and Breeding
- Food Science and Technology
- Biochemistry and Molecular Biology
Background:
- Genetic variants of milk proteins, particularly beta-casein, are significant for milk composition and technological properties.
- The A1/A2 hypothesis suggests beta-casein variant A1 may pose health risks, unlike beta-casein A2, due to beta-casomorphin-7 release.
Purpose of the Study:
- To adapt and establish analytical methods for identifying beta-casein genetic variants.
- To enable reliable differentiation of common beta-casein variants (A1, A2, B, C, A3) and homozygosity for A2.
Main Methods:
- Isoelectric focusing of milk proteins.
- Allele-specific polymerase chain reaction (AS-PCR) for differentiating variants A1, A2, B, and C.
- Amplification-created restriction site (ACRS)-PCR for detecting variant A3.
- Restriction fragment length polymorphism (RFLP)-PCR for discriminating A2 (homozygote/heterozygote) from non-A2 animals.
Main Results:
- AS-PCR reliably differentiated common beta-casein variants.
- ACRS-PCR successfully detected variant A3.
- RFLP-PCR accurately distinguished A2 from non-A2 animals.
- Traces of beta-casein A1 were detected in commercial 'A2 milk' in Austria.
Conclusions:
- Established PCR-based methods provide reliable identification of beta-casein genetic variants.
- Genotyping dairy cows and screening commercial products are recommended to ensure 'A2 milk' authenticity and prevent fraud.
- Consumer protection from unexpected beta-casein variant presence in 'A2 milk' is essential.
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