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Training data distribution significantly impacts the estimation of tissue microstructure with machine learning.

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Summary

Supervised machine learning (ML) for quantitative MRI parameter mapping is sensitive to training data distribution. Careful selection is crucial, as uniform sampling can improve accuracy for atypical parameters but reduce precision for typical ones.

Keywords:
machine learningmicrostructure imagingmodel fittingquantitative MRItraining data distribution

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Area of Science:

  • Biomedical Imaging
  • Machine Learning in Medical Physics

Background:

  • Quantitative MRI parameter mapping traditionally relies on model fitting.
  • Supervised machine learning (ML) offers a promising alternative for improved efficiency and accuracy.
  • The impact of training data characteristics on ML model performance requires thorough investigation.

Purpose of the Study:

  • To demonstrate and quantify the influence of varying training data distributions on the accuracy and precision of quantitative MRI parameter estimates derived from supervised ML.
  • To compare supervised ML fitting with traditional model fitting approaches.

Main Methods:

  • A two- and three-compartment biophysical model was fitted to in-vivo human brain and simulated diffusion MRI data.
  • Supervised ML models, including artificial neural networks and random forest regressors, were trained on datasets with diverse ground truth parameter distributions.
  • Parameter estimates from traditional fitting and various supervised ML approaches were compared using synthetic test data for accuracy and precision.

Main Results:

  • Training datasets mirroring healthy human data distributions yielded high precision but inaccurate estimates for atypical parameter combinations.
  • Uniform sampling across the entire plausible parameter space resulted in more accurate estimates for atypical parameters but potentially lower precision for typical ones.
  • Supervised ML parameter estimation accuracy is strongly dependent on the training data distribution.

Conclusions:

  • The distribution of training data significantly impacts the reliability of supervised ML for quantitative MRI parameter mapping.
  • High precision in ML-derived parameter maps can mask underlying bias, necessitating careful evaluation beyond visual inspection.
  • Understanding and optimizing training data distributions are critical for robust and accurate quantitative MRI analysis using supervised ML.