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Updated: Oct 19, 2025

Large-scale Top-down Proteomics Using Capillary Zone Electrophoresis Tandem Mass Spectrometry
Published on: October 24, 2018
A stationary pseudophase semi-permanent coating for open-tubular capillary liquid chromatography and
Mohamed Adel Ahmed1, Bren Mark Felisilda1, Alain Wuethrich2
1Australian Centre for Research on Separation Science (ACROSS), School of Natural Sciences-Chemistry, University of Tasmania, Hobart, TAS, Australia 7001.
Abstract:
We describe the chromatographic and electrochromatographic separation of small neutral and charged analytes using a fused silica capillary with a stationary pseudophase semi-permanent coating of didodecyldimethyl ammonium bromide (DDAB) aggregates. The coating was prepared by flushing the capillary with a DDAB solution that was rinsed out with the mobile phase. Our studies (i.e., electroosmotic flow measurements by capillary electrophoresis, chromatographic retention of a neutral probe and atomic force microscopy) suggested the formation of DDAB patchy admicelle, complete admicelle, or larger aggregates at the solid surface - liquid interface inside the capillary, depending on the concentration of DDAB used in coating the capillary. The analytical figures of merit for open tubular liquid chromatography (OT-LC, pressure driven) and open tubular capillary electrochromatography (OT-CEC, voltage driven) using a capillary coated with 0.5 mM DDAB and mobile phase/background solution of 25 mM borate buffer at pH 9.5 with 10% MeOH were the following: LOD = 3.0-5.0 µg/mL (OT-LC) and 2.5-5.0 µg/mL (OT-CEC); linearity R2 > 0.99 (peak area (OT-LC) and corrected peak area (OT-CEC)), intraday and interday repeatability%RSD < 5% (n = 12) for retention/migration time, peak area (OT-LC) and corrected peak area (OT-CEC). The reversed-phase and anion-exchange property of the stationary pseudophase was studied by the addition of organic solvents and sodium chloride to the mobile phase, respectively. We also demonstrate the increase in the ks of the tested analytes by implementing successive multiple ionic layer (SMIL) coating strategies with DDAB in combination with a cationic and/or anionic polyelectrolyte. The use of a stationary pseudophase coating is potentially an easy alternative way to conduct open-tubular liquid chromatography and electrochromatography.
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