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Non-human primate epidural ECoG analysis using explainable deep learning technology
Hoseok Choi1,2, Seokbeen Lim2, Kyeongran Min2,3
1Department of Neurology, University of California, San Francisco, CA, United States of America.
Journal of Neural Engineering
|October 25, 2021
Summary
This study introduces a novel 3D deep neural network (DNN) and 3D class activation map (CAM) to interpret neurophysiological data. The explainable AI (XAI) method reveals brain signal insights during movement, advancing neuroscience research.
Area of Science:
- Neuroscience
- Artificial Intelligence
- Machine Learning
Background:
- Explainable AI (XAI) is crucial for understanding artificial intelligence models.
- Existing XAI studies in neuroscience often lack deep neuroscientific interpretation of extracted features.
- Applying neural networks to neuroscientific data requires methods for explaining high-dimensional features.
Purpose of the Study:
- To actively explain high-dimensional learning features in neurophysiological data using XAI.
- To compare novel XAI-derived features with established neuroscientific findings.
- To develop and validate a deep learning approach for analyzing electrocorticogram (ECoG) data during movement.
Main Methods:
- Designed a 3D deep neural network (DNN) classifier to analyze neurophysiological data.
- Utilized 3D class activation mapping (3D CAM) to visualize high-dimensional classification features.
- Applied the 3D DNN and 3D CAM to classify monkey ECoG data from unimanual and bimanual movement experiments.
Main Results:
- The 3D DNN achieved superior classification accuracy compared to 2D DNN.
- 3D CAM analysis unexpectedly showed high activation in ipsilateral motor/somatosensory cortex during unimanual movement.
- The system identified critical temporal information at movement onset/offset for classifying bimanual movements.
Conclusions:
- This study is the first to integrate high-dimensional spatial, spectral, and temporal neurophysiological information with deep learning for explainability.
- The findings suggest motor cortex signals contain information about both contralateral and ipsilateral movements.
- The developed XAI methods offer a promising tool for neuroscience and electrophysiology research.

