Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Evolutionary Relationships through Genome Comparisons02:54

Evolutionary Relationships through Genome Comparisons

6.4K
Genome comparison is one of the excellent ways to interpret the evolutionary relationships between organisms. The basic principle of genome comparison is that if two species share a common feature, it is likely encoded by the DNA sequence conserved between both species. The advent of genome sequencing technologies in the late 20th century enabled scientists to understand the concept of conservation of domains between species and helped them to deduce evolutionary relationships across diverse...
6.4K
Genome Size and the Evolution of New Genes03:21

Genome Size and the Evolution of New Genes

2.7K
2.7K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

ETS-guided iPSC-endothelial models recapitulate malaria pathogenesis.

EMBO molecular medicine·2026
Same author

Therapeutic Drug Monitoring of Imatinib in Paediatric Chronic Myeloid Leukaemia: Towards Practical Implementation and Interpretation of Measured Plasma Concentrations.

Clinical pharmacokinetics·2026
Same author

Targeting the cell membrane in established and emerging model organisms.

Development (Cambridge, England)·2026
Same author

Physical embodiment enables information processing beyond explicit flow sensing in active matter.

Science advances·2026
Same author

From surface to depth: Using deep learning to predict striatal fMRI reward signaling from EEG.

Imaging neuroscience (Cambridge, Mass.)·2026
Same author

Sequential BCR::ABL1 evaluation during dose de-escalation in peripheral blood is more predictive of TFR success than single assessment at dose de-escalation in either peripheral blood or bone marrow.

Leukemia·2026

Related Experiment Video

Updated: Oct 14, 2025

Investigating Protein Sequence-structure-dynamics Relationships with Bio3D-web
09:51

Investigating Protein Sequence-structure-dynamics Relationships with Bio3D-web

Published on: July 16, 2017

15.6K

linus: Conveniently explore, share, and present large-scale biological trajectory data in a web browser.

Johannes Waschke1,2, Mario Hlawitschka2, Kerim Anlas3

  • 1Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.

Plos Computational Biology
|November 1, 2021
PubMed
Summary

Exploring complex biological trajectory data is simplified with linus, an interactive visualization tool. This system makes sharing and analyzing 3D trajectories easy for collaborative scientific discovery.

More Related Videos

A Web Tool for Generating High Quality Machine-readable Biological Pathways
08:01

A Web Tool for Generating High Quality Machine-readable Biological Pathways

Published on: February 8, 2017

17.9K
Neurovascular Network Explorer 2.0: A Simple Tool for Exploring and Sharing a Database of Optogenetically-evoked Vasomotion in Mouse Cortex In Vivo
08:32

Neurovascular Network Explorer 2.0: A Simple Tool for Exploring and Sharing a Database of Optogenetically-evoked Vasomotion in Mouse Cortex In Vivo

Published on: May 4, 2018

6.5K

Related Experiment Videos

Last Updated: Oct 14, 2025

Investigating Protein Sequence-structure-dynamics Relationships with Bio3D-web
09:51

Investigating Protein Sequence-structure-dynamics Relationships with Bio3D-web

Published on: July 16, 2017

15.6K
A Web Tool for Generating High Quality Machine-readable Biological Pathways
08:01

A Web Tool for Generating High Quality Machine-readable Biological Pathways

Published on: February 8, 2017

17.9K
Neurovascular Network Explorer 2.0: A Simple Tool for Exploring and Sharing a Database of Optogenetically-evoked Vasomotion in Mouse Cortex In Vivo
08:32

Neurovascular Network Explorer 2.0: A Simple Tool for Exploring and Sharing a Database of Optogenetically-evoked Vasomotion in Mouse Cortex In Vivo

Published on: May 4, 2018

6.5K

Area of Science:

  • Biology
  • Bioinformatics
  • Data Visualization

Background:

  • Large-scale biological trajectory data presents challenges in pattern exploration and communication.
  • Interactive visualizations are needed for collaborative hypothesis testing and data analysis.

Purpose of the Study:

  • To develop a tool that simplifies the exploration and sharing of 3D trajectory data.
  • To enable collaborative pattern discovery in complex biological datasets.

Main Methods:

  • Developed 'linus', a Python script for processing trajectory data.
  • Enriched trajectories with features like edge bundling and custom axes.
  • Generated interactive, web-based visualizations for online sharing.

Main Results:

  • 'linus' transforms complex trajectory data into easily shareable, interactive web visualizations.
  • Facilitates collaborative exploration and hypothesis testing on 3D trajectory data.
  • Streamlines the process of analyzing and communicating biological movement patterns.

Conclusions:

  • 'linus' provides an accessible platform for researchers to explore and share complex biological trajectory data.
  • Enhances collaborative scientific discovery by simplifying data visualization and interaction.
  • Enables efficient hypothesis generation and testing through intuitive web-based tools.