Related Experiment Video
Updated: Oct 11, 2025

From Molecules to Materials: Engineering New Ionic Liquid Crystals Through Halogen Bonding
Published on: March 24, 2018
2D constraint modifies packing behaviour: a halobenzene monolayer with X3 halogen-bonding motif
Jonathan A Davidson1, Stephen J Jenkins1, Fabrice Gorrec2
1Department of Chemistry, University of Cambridge, Cambridge, UK.
Researchers identified a crystalline monolayer of 1,3,5-triiodotrifluorobenzene on graphite. This structure features unique iodine arrangements and highlights the significant role of dispersion forces alongside halogen bonding in total interaction energy.
Area of Science:
- Materials Science
- Surface Chemistry
- Crystallography
Background:
- Understanding molecular interactions at surfaces is crucial for materials design.
- 1,3,5-triiodotrifluorobenzene is a molecule with potential for unique surface interactions.
- Crystalline monolayers offer ordered structures for studying fundamental chemical principles.
Purpose of the Study:
- To characterize the crystalline structure of a 1,3,5-triiodotrifluorobenzene monolayer on graphite.
- To investigate the nature and contribution of intermolecular forces within the monolayer.
- To compare experimental findings with theoretical simulations.
Main Methods:
- X-ray diffraction was used to determine the monolayer's crystalline structure.
- Density Functional Theory (DFT) simulations were employed to model the structure and interactions.
- Van der Waals corrections were applied in simulations to accurately assess interaction energies.
Main Results:
- An incommensurate hexagonal unit cell with a lattice parameter of 9.28(7) Å was identified.
- A novel trigonal arrangement of iodine atoms was observed, differing from the bulk structure.
- DFT simulations closely matched experimental data, confirming the structure.
Conclusions:
- Halogen bonding contributes approximately 50% to the total interaction energy in the monolayer.
- Dispersion interactions play a significant role, even in the presence of strong directional non-covalent bonds.
- The study provides insights into the interplay of different forces governing molecular self-assembly on surfaces.
Related Concept Videos
Structure of Benzene: Molecular Orbital Model
VSEPR Theory and the Effect of Lone Pairs
Conformations of Cyclohexane
The chair form is the most stable and derives its name from its resemblance to the “easy chair.” In the chair conformation, two carbon atoms are arranged out-of-plane — one above and one below, minimizing the torsional strain. In the chair form, the bond angle is very close to the ideal...
Hybridization of Atomic Orbitals I
Chair Conformation of Cyclohexane
The hydrogen atoms linked to carbons are arranged in two different axial and equatorial orientations to achieve this...
VSEPR Theory and the Basic Shapes

