Discovery of highly reactive self-splicing group II introns within the mitochondrial genomes of human pathogenic

Tianshuo Liu1, Anna M Pyle1,2,3

  • 1Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT, 06520, USA.

Nucleic Acids Research
|December 1, 2021
PubMed

Insights

Researchers identified highly reactive self-splicing group II introns in pathogenic fungi. These fungal RNA elements are promising new targets for antifungal drugs, offering novel treatment strategies against growing global health threats.

Area of Science:

  • Molecular biology
  • Mycology
  • Bioinformatics

Background:

  • Fungal pathogens pose increasing health risks with limited treatment options.
  • Self-splicing group II introns are potential antifungal drug targets but their distribution in fungi is poorly understood.

Purpose of the Study:

  • To develop a bioinformatic method for identifying group II introns in pathogenic fungi.
  • To characterize the distribution, structure, and reactivity of these introns.
  • To assess the potential of these introns as antifungal drug targets.

Main Methods:

  • Developed a bioinformatic workflow to scan sequence data for group II intron structural signatures.
  • Analyzed sequence data from thermally dimorphic fungi (Blastomyces, Coccidioides, Histoplasma).
  • Assessed intron self-splicing activity and inhibition by mitoxantrone in vitro.

Main Results:

  • Discovered ubiquitous group II introns in Blastomyces, Coccidioides, and Histoplasma.
  • These introns exhibit the highest biochemical reactivity reported for group II introns.
  • Introns self-splice rapidly under physiological conditions without protein cofactors.
  • Demonstrated in vitro inhibition of these introns by the FDA-approved drug mitoxantrone.

Conclusions:

  • Structure-based bioinformatic searches are effective for identifying regulatory RNA elements in pathogens.
  • Ubiquitous, highly reactive self-splicing group II introns in pathogenic fungi represent promising antifungal drug targets.
  • These findings open new avenues for developing novel antifungal therapies.

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