Related Experiment Video
Updated: Oct 10, 2025
![The Synthesis of [Sn10SiSiMe334]2- Using a Metastable SnI Halide Solution Synthesized via a Co-condensation Technique](/_next/image?url=https%3A%2F%2Fcloudfront.jove.com%2FCDNSource%2Fteasers%2F54498.jpg&w=3840&q=50)
12:43
The Synthesis of [Sn10SiSiMe334]2- Using a Metastable SnI Halide Solution Synthesized via a Co-condensation Technique
Published on: November 28, 2016
8.7K
Predicting atomic-level reaction mechanisms for SN2 reactions via machine learning
Fanbin Meng1, Yan Li2, Dunyou Wang2
1School of Medical Information Engineering, Jining Medical University, Jining 272067, Shandong, China.
The Journal of Chemical Physics
|December 16, 2021
Summary
This study introduces a machine learning model to predict atomic-level reaction mechanisms. The joint-voting model improves prediction accuracy and convergence speed for chemical dynamics.
Area of Science:
- Chemistry
- Materials Science
- Computational Science
Background:
- Understanding atomic-level reaction mechanisms is crucial for advancing chemical sciences.
- Predicting dynamical processes in structural evolution requires sophisticated computational approaches.
Purpose of the Study:
- To develop and validate a machine learning model for predicting atomic-level reaction mechanisms.
- To assess the impact of data class granularity on model performance and convergence.
Main Methods:
- A joint-voting model integrating three parallel machine learning algorithms was developed.
- The model was trained on 1700 trajectories, with experiments using ten, seven, and five classes.
- Model convergence and prediction accuracy were evaluated across different class divisions.
Main Results:
- The five-class model demonstrated the fastest convergence and highest prediction accuracy (92.0%).
- Prediction success rates increased as the number of trajectories per class increased.
- Model convergence was achieved with 100, 100, and 70 trajectories for the ten-, seven-, and five-class experiments, respectively.
Conclusions:
- Machine learning effectively predicts elementary dynamical processes in structural evolution.
- The proposed joint-voting model advances the prediction of atomic-level reaction mechanisms.
- Optimizing data stratification enhances the efficiency and accuracy of machine learning models in chemistry.
More Related Videos
Related Concept Videos
SN2 Reaction: Mechanism
15.1K
The kinetic studies of SN2 reactions suggest an essential feature of its mechanism: it is a single-step process without intermediates. Here, both the nucleophile and the substrate participate in the rate-determining step.
The presence of the more electronegative halogen in the substrate creates a polarized carbon-halide bond. The halide pulls the electron cloud generating an electrophilic center at the carbon atom. Thus, the carbon atom carries a partial positive charge while the halide has a...
The presence of the more electronegative halogen in the substrate creates a polarized carbon-halide bond. The halide pulls the electron cloud generating an electrophilic center at the carbon atom. Thus, the carbon atom carries a partial positive charge while the halide has a...
15.1K
SN2 Reaction: Kinetics
8.9K
Kinetic Studies and Significance
In a chemical reaction, a relationship exists between the concentration of reactants and the rate at which the reaction proceeds. The study to measure this relationship is known as the kinetics of a chemical reaction. Kinetic studies are used to deduce the rate law of a chemical reaction, which provides information about the species involved during the transition state of the rate-determining step. Thus, kinetic studies help to derive the mechanism of a...
In a chemical reaction, a relationship exists between the concentration of reactants and the rate at which the reaction proceeds. The study to measure this relationship is known as the kinetics of a chemical reaction. Kinetic studies are used to deduce the rate law of a chemical reaction, which provides information about the species involved during the transition state of the rate-determining step. Thus, kinetic studies help to derive the mechanism of a...
8.9K
Predicting Products: SN1 vs. SN2
14.3K
Nucleophilic substitution reactions of alkyl halides can proceed via an SN1 or an SN2 mechanism. While in SN2 reactions, the nucleophile attacks the substrate simultaneously as the leaving group departs, in SN1 reactions, the substrate first dissociates to give the carbocation intermediate. Various factors such as the structure of the substrate, the strength of the nucleophile, and the nature of the solvent promote one mechanism over the other.
With increased substitution on the alkyl halide,...
With increased substitution on the alkyl halide,...
14.3K
SN1 Reaction: Mechanism
12.6K
Kinetic studies of ionization of a tertiary halide in a protic solvent suggest that only the substrate participates in the rate-determining step (slow step). The nucleophile is involved only after the slowest step. The SN1 reaction takes place in a multiple-step mechanism.
Firstly, the haloalkane ionizes to generate a carbocation intermediate and a halide ion. This heterolytic cleavage is highly endothermic with large activation energy. The ionization of the substrate, facilitated by a...
Firstly, the haloalkane ionizes to generate a carbocation intermediate and a halide ion. This heterolytic cleavage is highly endothermic with large activation energy. The ionization of the substrate, facilitated by a...
12.6K
SN2 Reaction: Transition State
10.4K
An SN2 reaction of an alkyl halide is a single-step process in which bond formation between the nucleophile and the substrate and bond breaking between the substrate and the halide occurs simultaneously through a transition state without forming an intermediate.
When the nucleophile approaches the electrophilic carbon with its lone pairs, the halide acts as a leaving group and moves away with the electron-pair bonded to the carbon. Dotted partial bonds represent the bonds being formed or broken...
When the nucleophile approaches the electrophilic carbon with its lone pairs, the halide acts as a leaving group and moves away with the electron-pair bonded to the carbon. Dotted partial bonds represent the bonds being formed or broken...
10.4K
SN1 Reaction: Kinetics
8.2K
In an SN2 reaction, the reaction rate depends on both the type of nucleophile and the substrate. A hindered tertiary alkyl halide is practically inert to the SN2 mechanism despite using a strong nucleophile.
However, Sir Christopher Ingold and Edward D. Hughes, who studied the kinetics of various nucleophilic substitution reactions, noticed that a tertiary alkyl halide does undergo a nucleophilic substitution reaction in the presence of a weak nucleophile. While studying the substitution...
However, Sir Christopher Ingold and Edward D. Hughes, who studied the kinetics of various nucleophilic substitution reactions, noticed that a tertiary alkyl halide does undergo a nucleophilic substitution reaction in the presence of a weak nucleophile. While studying the substitution...
8.2K

