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Updated: Oct 8, 2025

Array Comparative Genomic Hybridization Array CGH for Detection of Genomic Copy Number Variants
Published on: February 21, 2015
[Genetic analysis of a case with 2q37 microdeletion syndrome]
Xiaohui Lian1, Xiao Zhang, Mingyan Huang
1Laboratory of Basic Medicine, Dongfang Hospital (900th Hospital of Joint Logistics Support Force), Xiamen University, Fuzhou, Fujian 350025, China. zengjian1980222@163.com.
Objective:
To diagnose and fine map a deletion in chromosome region 2q37.
Methods:
G-banded chromosomal karyotyping, multiplex ligation-dependent probe amplification (MLPA), single nucleotide polymorphism array (SNP-array), and fluorescence in situ hybridization (FISH) were carried out in conjunct for the analysis.
Results:
The patient was found to have karyotype of 46,XY,del(2)(q3?), MLPA revealed one copy number of both CAPN10-3 and ATG4B-7 genes from the 2q37.3 region, Both parents were found to be normal upon chromosome karyotyping and MLPA. SNP-array has found a 9.7 Mb deletion in the 2q37.1.37.3 region. FISH analysis has confirmed there is a single copy for 2q37.3.
Conclusion:
Combination of MLPA, FISH and SNP-array have enabled accurate diagnosis for the patient, and also provided more clues for the correlation of genotype with the phenotype of the disease, and a basis for genetic counseling.
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