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The evolutionary pathways for local adaptation in mountain hares.

Iwona Giska1, João Pimenta1,2,3, Liliana Farelo1,3

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Local adaptation in mountain hares evolved rapidly, driven by standing genetic variation and introgressive hybridization. This study reveals key genes influencing traits like coat color and altitude adaptation in isolated populations.

Keywords:
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Area of Science:

  • Evolutionary Biology
  • Genomics
  • Conservation Genetics

Background:

  • Understanding local adaptation is crucial for identifying unique populations and lineages for conservation.
  • Mountain hares (Lepus timidus) inhabit diverse, isolated environments across Ireland, the Alps, and Fennoscandia.

Purpose of the Study:

  • To identify genetic signatures of local adaptation in mountain hares from distinct geographic regions.
  • To investigate the role of standing genetic variation and introgressive hybridization in adaptive evolution.

Main Methods:

  • Utilized RAD sequencing and whole-genome sequencing to analyze genetic differentiation.
  • Employed demographic modeling and genome-wide scans to detect selective sweeps.
  • Conducted comparative genomic analyses and coalescent simulations across hare species.

Main Results:

  • Identified significant genetic differentiation and area-specific selective sweeps in Irish, Alpine, and Fennoscandian mountain hares.
  • Found candidate genes associated with coat color, high-altitude adaptation, and body size variation.
  • Evidence suggests both species-specific adaptive variants and introgressed variants contribute to local adaptation.

Conclusions:

  • Local adaptation in mountain hares occurred over a short evolutionary timescale (approx. 20,000 years).
  • Standing adaptive variation, including introgressed alleles, played a critical role in post-glacial species dynamics.
  • The ASIP gene variant may explain brown winter coats in Irish hares, highlighting repeated evolutionary patterns.