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Published on: March 17, 2023
Genetic Alterations in Mitochondrial DNA Are Complementary to Nuclear DNA Mutations in Pheochromocytomas
Mouna Tabebi1, Małgorzata Łysiak1, Ravi Kumar Dutta1
1Department of Biomedical and Clinical Sciences (BKV), Linköping University, 581 83 Linköping, Sweden.
Background:
Somatic mutations, copy-number variations, and genome instability of mitochondrial DNA (mtDNA) have been reported in different types of cancers and are suggested to play important roles in cancer development and metastasis. However, there is scarce information about pheochromocytomas and paragangliomas (PCCs/PGLs) formation.
Material:
To determine the potential roles of mtDNA alterations in sporadic PCCs/PGLs, we analyzed a panel of 26 nuclear susceptibility genes and the entire mtDNA sequence of seventy-seven human tumors, using next-generation sequencing, and compared the results with normal adrenal medulla tissues. We also performed an analysis of copy-number alterations, large mtDNA deletion, and gene and protein expression.
Results:
Our results revealed that 53.2% of the tumors harbor a mutation in at least one of the targeted susceptibility genes, and 16.9% harbor complementary mitochondrial mutations. More than 50% of the mitochondrial mutations were novel and predicted pathogenic, affecting mitochondrial oxidative phosphorylation. Large deletions were found in 26% of tumors, and depletion of mtDNA occurred in more than 87% of PCCs/PGLs. The reduction of the mitochondrial number was accompanied by a reduced expression of the regulators that promote mitochondrial biogenesis (PCG1α, NRF1, and TFAM). Further, P62 and LC3a gene expression suggested increased mitophagy, which is linked to mitochondrial dysfunction.
Conclusion:
The pathogenic role of these finding remains to be shown, but we suggest a complementarity and a potential contributing role in PCCs/PGLs tumorigenesis.
Insights
Mitochondrial DNA (mtDNA) mutations and alterations are common in pheochromocytomas and paragangliomas (PCCs/PGLs), potentially contributing to tumor formation. These changes affect mitochondrial function and biogenesis, suggesting a role in tumorigenesis.
Area of Science:
- Genomics
- Cancer Biology
- Mitochondrial Medicine
Background:
- Mitochondrial DNA (mtDNA) alterations are implicated in various cancers.
- Limited data exists on mtDNA's role in pheochromocytomas and paragangliomas (PCCs/PGLs) formation.
Purpose of the Study:
- Investigate the role of mtDNA alterations in sporadic PCCs/PGLs.
- Analyze nuclear susceptibility genes and mtDNA sequences in PCCs/PGLs.
Main Methods:
- Next-generation sequencing of 26 nuclear genes and whole mtDNA in 77 tumors and normal tissues.
- Analysis of copy-number alterations, large mtDNA deletions, and gene/protein expression.
Main Results:
- 53.2% of tumors had nuclear gene mutations; 16.9% had complementary mtDNA mutations.
- Over 50% of mtDNA mutations were novel, affecting oxidative phosphorylation.
- 26% of tumors had large mtDNA deletions; 87% showed mtDNA depletion.
- Reduced mitochondrial biogenesis regulators (PCG1α, NRF1, TFAM) and increased mitophagy (P62, LC3a) were observed.
Conclusions:
- Mitochondrial dysfunction and alterations are prevalent in PCCs/PGLs.
- These findings suggest a potential contributing role of mtDNA alterations in PCCs/PGLs tumorigenesis.
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