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Heterogeneity Mapping of Protein Expression in Tumors using Quantitative Immunofluorescence
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Quantifying Heterogeneity in Tumors: Proposing a New Method Utilizing Convolutional Neuronal Networks.

Georg Prokop1, Michael Örtl2, Marina Fotteler2

  • 1Department of Neuropathology, Institute of Pathology, Technical University of Munich, Germany.

Studies in Health Technology and Informatics
|January 22, 2022
PubMed
Summary

We developed a novel method using two convolutional neural networks (CNNs) to quantify glioblastoma (GBM) heterogeneity. This approach aids in integrated diagnosis and precision medicine for brain tumors.

Keywords:
Convolutional Neuronal NetworkDigital PathologyGlioblastomaNeuropathologyTumor heterogeneity

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Area of Science:

  • Oncology
  • Medical Imaging
  • Computational Biology

Background:

  • Glioblastoma (GBM) exhibits significant heterogeneity, contributing to poor patient survival.
  • Current methods for quantifying GBM heterogeneity are not clinically applicable or cost-efficient.
  • Addressing heterogeneity is crucial for improving glioblastoma treatment outcomes.

Purpose of the Study:

  • To present a novel, cost-efficient method for quantifying glioblastoma heterogeneity using artificial intelligence.
  • To establish a tool for integrated diagnosis by incorporating image analysis with clinical and mutational data.
  • To explore the potential application of this method in precision medicine for brain tumors.

Main Methods:

  • Digitization of glioblastoma tumor samples.
  • Utilization of two convolutional neural networks (CNNs): one for GBM delimitation and another for heterogeneity quantification.
  • Integration of image analysis with potential incorporation of clinical data and mutational status.

Main Results:

  • The developed method successfully quantifies heterogeneity within glioblastoma tumors.
  • Convolutional neural networks demonstrate the ability to interpret complex image data and identify hidden patterns.
  • The approach shows promise for a more integrated diagnostic process.

Conclusions:

  • This novel CNN-based method offers a promising tool for quantifying glioblastoma heterogeneity.
  • The approach has the potential to advance precision medicine by enabling integrated diagnosis.
  • The methodology may be adaptable for assessing heterogeneity in other tumor types.