Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Hybrid Zones02:29

Hybrid Zones

20.6K
Hybrid zones are narrow regions where two closely related species interact, mate, and produce hybrids. Relative to either parent species, hybrids may possess distinct phenotypic or genetic differences that impact their survival and reproductive success. The genetic variances introduced by hybridization influence species diversity and speciation processes within the hybrid zone.
20.6K
Labeling DNA Probes03:31

Labeling DNA Probes

8.5K
DNA probes are fragments of DNA labeled with a reporter tag to enable their detection or purification. The resulting labeled DNA probes can then hybridize to target nucleic acid sequences through complementary base-pairing, and may be used to recover or identify these regions.
Radioisotopes, fluorophores, or small molecule binding partners like biotin or digoxigenin, are the most widely used reporter tags for labeling DNA probes. These labels can be attached to the probe DNA molecule via...
8.5K
In-situ Hybridization02:31

In-situ Hybridization

9.7K
In situ hybridization (ISH) is a technique used to detect and localize specific DNA or RNA molecules in cells, tissue, or tissue sections using a labeled probe. The technique was first used in 1969 for the investigation of nucleic acids. It is currently an essential tool in scientific research and clinical settings, especially for diagnostic purposes.
Types of probes and labels
A probe is a complementary strand of DNA or RNA that binds to corresponding nucleotide sequences in a cell. Many...
9.7K
Ligand Binding and Linkage00:49

Ligand Binding and Linkage

3.5K
3.5K
Hybridization of Atomic Orbitals II03:35

Hybridization of Atomic Orbitals II

34.5K
sp3d and sp3d 2 Hybridization
34.5K
FISH - Fluorescent In-situ Hybridization02:07

FISH - Fluorescent In-situ Hybridization

22.0K
Fluorescence in situ hybridization, or FISH, was developed in the early 1980s and has quickly become one of the most widely used techniques in cytogenetics. Labeled probes are used to bind complementary DNA or RNA sequences on a chromosome or in a region within a cell. Earlier, the probes could only be obtained by cloning or reverse transcription of a DNA template. Currently, the probe oligonucleotides can be synthesized synthetically. Additionally, with the advancement of optical techniques,...
22.0K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Dithering suppresses half-harmonic neural synchronisation to photic stimulation in humans.

Brain stimulation·2026
Same author

Enhancing accessibility: Development and usability testing of mobile application mitigating sexual harassment for visually impaired masseurs.

Assistive technology : the official journal of RESNA·2024
Same author

Design of image intelligent focusing system based on improved SMD function and RBF algorithm.

PloS one·2024
Same author

Neural matrix factorization++ based recommendation system.

F1000Research·2024
Same author

Machine learning methods to predict particulate matter PM <sub>2.5</sub>.

F1000Research·2022
Same author

Utilizing data sampling techniques on algorithmic fairness for customer churn prediction with data imbalance problems.

F1000Research·2022
Same journal

Exploring potential strategies to enhance memory and cognition in aging mice.

F1000Research·2026
Same journal

Construction an Implicit Block Multi-Steps Approach for Solving Sixth-Order Fractional Differential Equations.

F1000Research·2026
Same journal

Kansei Engineering in the Evolving Service Sector: A Decade of Insights.

F1000Research·2026
Same journal

A Safety-First Mindset:  Role of Patient Safety Culture in Enhancing Healthcare Workers' Emotional Intelligence.

F1000Research·2026
Same journal

Decoding Decisions: Personality-Interest Motivational Sequences as Predictors of Career Paths.

F1000Research·2026
Same journal

Beyond the Transparent Barrier: A Domain Visualization and Integrative Review of Contemporary Research on Gender-Based Professional Stasis.

F1000Research·2026
See all related articles

Related Experiment Video

Updated: Oct 4, 2025

Optimization of Synthetic Proteins: Identification of Interpositional Dependencies Indicating Structurally and/or Functionally Linked Residues
07:08

Optimization of Synthetic Proteins: Identification of Interpositional Dependencies Indicating Structurally and/or Functionally Linked Residues

Published on: July 14, 2015

7.4K

Improving the support for XML dynamic updates using a hybridization labeling scheme (ORD-GAP).

Su-Cheng Haw1, Aisyah Amin1, Chee-Onn Wong1

  • 1Faculty of Computing & Informatics, Multimedia University, Cyberjaya, Selangor, 63100, Malaysia.

F1000Research
|February 2, 2022
PubMed
Summary
This summary is machine-generated.

A new labeling scheme, ORD-GAP, efficiently handles dynamic updates in eXtensible Markup Language (XML) databases. This robust approach optimizes storage and query retrieval for large datasets, improving web content management.

Keywords:
XML databasesXML labeling scheme.XML-RDB mappingdynamic updatesmapping scheme

More Related Videos

Technical Demonstration of Whole Genome Array Comparative Genomic Hybridization
16:37

Technical Demonstration of Whole Genome Array Comparative Genomic Hybridization

Published on: August 5, 2008

12.9K
Split Hybridization Probe Utilizing a DNA Fluorescent Light-up Aptamer as a Signal Reporter for Sequence-Specific Nucleic Acid Analysis
07:10

Split Hybridization Probe Utilizing a DNA Fluorescent Light-up Aptamer as a Signal Reporter for Sequence-Specific Nucleic Acid Analysis

Published on: July 8, 2025

520

Related Experiment Videos

Last Updated: Oct 4, 2025

Optimization of Synthetic Proteins: Identification of Interpositional Dependencies Indicating Structurally and/or Functionally Linked Residues
07:08

Optimization of Synthetic Proteins: Identification of Interpositional Dependencies Indicating Structurally and/or Functionally Linked Residues

Published on: July 14, 2015

7.4K
Technical Demonstration of Whole Genome Array Comparative Genomic Hybridization
16:37

Technical Demonstration of Whole Genome Array Comparative Genomic Hybridization

Published on: August 5, 2008

12.9K
Split Hybridization Probe Utilizing a DNA Fluorescent Light-up Aptamer as a Signal Reporter for Sequence-Specific Nucleic Acid Analysis
07:10

Split Hybridization Probe Utilizing a DNA Fluorescent Light-up Aptamer as a Signal Reporter for Sequence-Specific Nucleic Acid Analysis

Published on: July 8, 2025

520

Area of Science:

  • Computer Science
  • Database Management
  • Web Technologies

Background:

  • eXtensible Markup Language (XML) is a standard for web data exchange.
  • Efficient query processing and dynamic updates are crucial for XML databases.
  • Existing labeling schemes are costly to update, especially for large datasets.

Purpose of the Study:

  • To develop a robust and persistent XML labeling scheme that supports dynamic updates.
  • To address the limitations of existing labeling methods that require re-labeling upon data modification.
  • To improve the efficiency of XML database operations.

Main Methods:

  • Introduction of ORD-GAP (Order Gap), a novel labeling scheme assigning unique identifiers with gaps.
  • ORD-GAP facilitates identification of hierarchical relationships (Parent-Child, Ancestor-Descendant, sibling).
  • Adoption of the OrdPath labeling scheme for future insertions and implementation in three insertion use cases.

Main Results:

  • ORD-GAP demonstrates robustness in dynamic update scenarios.
  • Experimental evaluations on the DBLP dataset show superior performance over ORDPath and ME Labeling.
  • ORD-GAP achieved better database storage size, data loading time, and query retrieval times.

Conclusions:

  • ORD-GAP is a robust labeling scheme designed for efficient future insertions in XML databases.
  • An efficient mapping scheme is proposed, leveraging ORD-GAP for effective XML to Relational Database Management (RDB) transformation.