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Updated: Oct 4, 2025

Assessing Cellular Target Engagement by SHP2 PTPN11 Phosphatase Inhibitors
Published on: July 17, 2020
Allosteric inhibition reveals SHP2-mediated tumor immunosuppression in colon cancer by single-cell transcriptomics
Jian Gao1, Zhigui Wu1, Mingxia Zhao1,2
1State Key Laboratory of Pharmaceutical Biotechnology, Chemistry and Biomedicine Innovation Center (ChemBIC), School of Life Sciences, Nanjing University, Nanjing 210023, China.
Abstract:
Colorectal cancer (CRC), a malignant tumor worldwide consists of microsatellite instability (MSI) and stable (MSS) phenotypes. Although SHP2 is a hopeful target for cancer therapy, its relationship with innate immunosuppression remains elusive. To address that, single-cell RNA sequencing was performed to explore the role of SHP2 in all cell types of tumor microenvironment (TME) from murine MC38 xenografts. Intratumoral cells were found to be functionally heterogeneous and responded significantly to SHP099, a SHP2 allosteric inhibitor. The malignant evolution of tumor cells was remarkably arrested by SHP099. Mechanistically, STING-TBK1-IRF3-mediated type I interferon signaling was highly activated by SHP099 in infiltrated myeloid cells. Notably, CRC patients with MSS phenotype exhibited greater macrophage infiltration and more potent SHP2 phosphorylation in CD68+ macrophages than MSI-high phenotypes, suggesting the potential role of macrophagic SHP2 in TME. Collectively, our data reveals a mechanism of innate immunosuppression mediated by SHP2, suggesting that SHP2 is a promising target for colon cancer immunotherapy.
Insights
SHP2 inhibition with SHP099 halts colorectal cancer (CRC) progression by activating anti-tumor immunity in myeloid cells. This finding highlights SHP2 as a potential therapeutic target for colon cancer immunotherapy, particularly in microsatellite-stable tumors.
Area of Science:
- Oncology
- Immunology
- Molecular Biology
Background:
- Colorectal cancer (CRC) presents microsatellite instability (MSI) or stable (MSS) phenotypes.
- SHP2 is a potential cancer therapy target, but its role in innate immunosuppression is unclear.
Purpose of the Study:
- To investigate the role of SHP2 in the tumor microenvironment (TME) of colorectal cancer.
- To explore the therapeutic potential of SHP2 inhibition in CRC.
Main Methods:
- Single-cell RNA sequencing of murine MC38 xenografts.
- Treatment with SHP099, a SHP2 allosteric inhibitor.
Main Results:
- SHP099 treatment arrested malignant tumor cell evolution.
- SHP099 activated STING-TBK1-IRF3-mediated type I interferon signaling in myeloid cells.
- MSS CRC patients showed increased macrophage infiltration and SHP2 phosphorylation in CD68+ macrophages.
Conclusions:
- SHP2 mediates innate immunosuppression in colorectal cancer.
- Targeting SHP2 with inhibitors like SHP099 shows promise for colon cancer immunotherapy, especially in MSS tumors.
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