State estimation for nonlinear state-space transmission models of tuberculosis
Duayne Strydom1, Johan Derik le Roux1, Ian Keith Craig1
1Department of Electrical, Electronic and Computer Engineering, University of Pretoria, South Africa.
Researchers developed state estimators to estimate the quanta generation rate, a key factor in tuberculosis (TB) transmission risk. Kalman filters accurately estimated this rate, even with daily measurements, offering potential for TB control in hospitals.
Area of Science:
- Epidemiology
- Mathematical Modeling
- Control Theory
Background:
- Tuberculosis (TB) presents a significant global health challenge with high mortality rates.
- Existing transmission models, like the Gammaitoni and Nucci (GN) model, rely on the quanta generation rate, which is not directly measurable.
- Accurate estimation of infectivity parameters is crucial for effective TB transmission control.
Purpose of the Study:
- To develop and validate state estimators for estimating the quanta generation rate from available measurements.
- To adapt the GN model into observable single-room and two-room configurations for estimation.
- To assess the performance of Kalman filters in estimating the quanta generation rate under different measurement scenarios.
Main Methods:
- Adaptation of the GN model into augmented single-room and simplified two-room models.
- Demonstration of model observability for theoretical estimation feasibility.
- Application of continuous-time extended Kalman filters (EKF) with a 60-second sampling rate.
- Utilization of a hybrid extended Kalman filter (HEKF) for a more realistic daily measurement sampling rate.
Main Results:
- Both adapted GN models were proven to be observable.
- The continuous-time EKF achieved accurate quanta generation rate estimates with a 60-second sampling rate.
- The HEKF successfully provided accurate quanta generation rate estimates with a daily sampling rate.
Conclusions:
- State estimators, particularly Kalman filters, can accurately estimate the unmeasurable quanta generation rate.
- The developed models and estimation techniques are viable for assessing TB transmission risk.
- Future applications may involve integrating these methods into control systems for real-time TB transmission reduction in confined settings like hospitals.
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