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Updated: Oct 3, 2025

Long Term Intravital Multiphoton Microscopy Imaging of Immune Cells in Healthy and Diseased Liver Using CXCR6.Gfp Reporter Mice
Published on: March 24, 2015
Intrahepatic microbes govern liver immunity by programming NKT cells
Joshua C Leinwand1, Bidisha Paul2, Ruonan Chen1
1S.A. Localio Laboratory, Department of Surgery, New York University (NYU) Langone Health, New York, New York, USA.
Scientists discovered a unique liver microbiome in mice and humans, distinct from the gut. This hepatic microbiome influences liver immunity, specifically through bacteroidetes species, impacting immune cell activity and adaptive immunity.
Area of Science:
- Immunology
- Microbiology
- Hepatology
Background:
- The liver has traditionally been considered a sterile organ.
- The gut microbiome's role in systemic immunity is well-established, but the liver's microbial composition remains unexamined.
- Understanding the liver's microbial environment is crucial for comprehending hepatic immunity.
Purpose of the Study:
- To investigate the existence and characteristics of a hepatic microbiome in mice and humans.
- To determine the relationship between the liver microbiome and hepatic immunity.
- To elucidate the mechanisms by which the liver microbiome influences immune responses.
Main Methods:
- Comparative analysis of liver and gut microbiome composition in mice and humans.
- Fecal microbial transfer experiments to assess microbiome seeding.
- Antibiotic targeting of specific bacterial species (Bacteroidetes) to evaluate immune effects.
- Analysis of immune cell populations, antigen-presenting cell (APC) maturation, and adaptive immunity markers.
- Investigation of molecular pathways involving glycosphingolipids, NKT cells, and CCL5 signaling.
Main Results:
- A distinct liver microbiome was identified, differing from the gut microbiome and enriched in Proteobacteria.
- The liver microbiome composition changes with age and is influenced by environmental and host factors.
- Fecal microbial transfer demonstrated selective colonization of the liver from the gut.
- Targeting Bacteroidetes with antibiotics significantly reduced hepatic immune cells, impaired APC maturation, and diminished adaptive immunity.
- A microbial/glycosphingolipid/NKT/CCL5 axis was identified as a key regulator of hepatic immunity.
Conclusions:
- The liver harbors a unique microbiome that plays a critical role in regulating hepatic immunity.
- Hepatic immunity is dependent on specific gut-derived bacteria, particularly Bacteroidetes.
- The findings reveal a novel axis involving microbial components, immune cells, and signaling pathways that govern liver immune responses.
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