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EP-PINNs: Cardiac Electrophysiology Characterisation Using Physics-Informed Neural Networks
Clara Herrero Martin1,2, Alon Oved3, Rasheda A Chowdhury4
1Department of Bioengineering, Imperial College London, London, United Kingdom.
Frontiers in Cardiovascular Medicine
|February 21, 2022
Summary
EP-PINNs, a novel tool, accurately simulates action potentials and estimates electrophysiological properties from sparse data. This physics-informed neural network approach aids in diagnosing and treating arrhythmias like atrial fibrillation.
Area of Science:
- Computational Biology
- Biophysics
- Medical Technology
Background:
- Accurate inference of electrophysiological (EP) tissue properties from action potential recordings is crucial for diagnosing and treating arrhythmias, such as atrial fibrillation.
- Current methods for EP parameter estimation are often limited by data requirements and complexity.
- Identifying localized pathologies like fibrosis, which contribute to arrhythmias, remains a challenge.
Purpose of the Study:
- To introduce EP-PINNs (Physics-Informed Neural Networks), a novel computational tool for accurate action potential simulation and EP parameter estimation.
- To demonstrate the capability of EP-PINNs in reconstructing spatio-temporal action potential evolution and predicting key EP parameters.
- To validate the utility of EP-PINNs in identifying tissue heterogeneities and characterizing drug effects on action potential duration (APD).
Main Methods:
- Development and application of Physics-Informed Neural Networks (EP-PINNs) for simulating electrophysiological activity.
- Utilizing 1D and 2D *in silico* data to train and validate EP-PINNs for action potential reconstruction and parameter prediction.
- Employing optical mapping data from *in vitro* biological preparations to assess EP-PINNs' effectiveness in characterizing anti-arrhythmic drug effects on APD.
Main Results:
- EP-PINNs successfully reconstructed spatio-temporal action potential evolution from sparse electrophysiological data.
- The tool accurately predicted parameters including action potential duration (APD), excitability, and diffusion coefficients.
- EP-PINNs demonstrated the ability to identify heterogeneities in EP properties and characterize drug-induced changes in APD.
Conclusions:
- EP-PINNs offer a powerful and accurate method for action potential simulation and electrophysiological parameter estimation.
- The tool's capability to detect tissue heterogeneities suggests potential for identifying localized pathologies like fibrosis.
- EP-PINNs show significant promise as a clinical tool for characterizing arrhythmias and guiding treatment strategies.
Keywords:
Physics Informed Neural Network (PINN)arrhythmia (any)artificial intelligenceatrial fibrillationbiophysical modellingcardiac electrophysiologyoptical mappingparameter estimationMore Related Videos
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