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CREST, a Cas13-Based, Rugged, Equitable, Scalable Testing (CREST) for SARS-CoV-2 Detection in Patient Samples
Zach Aralis1, Jennifer N Rauch2, Morgane Audouard1
1UC Santa Barbara, Santa Barbara, California.
Current Protocols
|February 23, 2022
Summary
A new CRISPR-Cas13-based test, CREST (Cas13-based, rugged, equitable, scalable testing), offers accurate, accessible, and reliable detection of SARS-CoV-2. This method provides a low-cost solution for widespread COVID-19 surveillance.
Area of Science:
- Molecular Biology
- Infectious Diseases
- Biotechnology
Background:
- The COVID-19 pandemic necessitates widespread and accurate SARS-CoV-2 detection for effective control measures.
- Current diagnostic methods require improvement in terms of accessibility, cost, and scalability for global surveillance.
Purpose of the Study:
- To develop and characterize a novel CRISPR-Cas13-based assay for sensitive and specific SARS-CoV-2 detection.
- To present CREST (Cas13-based, rugged, equitable, scalable testing) as a viable alternative for molecular diagnostics.
Main Methods:
- Utilized the CRISPR-Cas13 system for targeted detection of SARS-CoV-2 genetic material.
- Developed protocols for LwaCas13a purification and in vitro transcription of synthetic targets.
- Validated the assay using real-time PCR and fluorescence detection systems.
Main Results:
- The CREST assay demonstrated high specificity and sensitivity for SARS-CoV-2 detection.
- The method proved to be highly accessible and scalable for widespread application.
- CREST offers a dependable and low-cost alternative for SARS-CoV-2 surveillance.
Conclusions:
- CREST is a robust and equitable diagnostic tool for SARS-CoV-2 detection.
- The CRISPR-Cas13-based approach provides a promising solution for global pandemic preparedness and response.
- This technology can significantly aid in continuous and widespread testing efforts.

