Detecting Phytoplankton Cell Viability Using NIR Raman Spectroscopy and PCA
Nina I Novikova1,2,3,4, Hannah Matthews1,2,3,4, Isabelle Williams1,2,3,4
1School of Chemical Sciences, University of Auckland, 23 Symonds Street, Auckland 1010, New Zealand.
ACS Omega
|February 28, 2022
Summary
Near-infrared Raman spectroscopy combined with multivariate analysis reliably detects phytoplankton viability by analyzing spectral shifts, particularly in carotenoid bands, overcoming limitations of visible methods.
Area of Science:
- Marine biology
- Spectroscopy
- Biotechnology
Background:
- Raman spectroscopy offers potential for monitoring phytoplankton but faces challenges with pigment interference and spectral complexity.
- Visible detection methods are limited in pigment-rich biological samples.
- Developing reliable in situ methods for phytoplankton analysis is crucial for marine ecosystem monitoring.
Purpose of the Study:
- To develop a reliable method for assessing phytoplankton cell viability using Raman spectroscopy.
- To overcome the limitations of visible detection methods in pigment-rich phytoplankton.
- To identify spectral features indicative of cell viability across different phytoplankton species.
Main Methods:
- Utilized 1064 nm confocal Raman spectroscopy, a near-infrared (NIR) approach.
- Applied multivariate statistical analysis, including principle component analysis (PCA) and partial least-squares discriminant analysis (PLS-DA).
- Investigated cell viability in diatom (Chaetoceros muelleri) and haptophyte (Diacronema lutheri, Tisochrysis lutea) species.
Main Results:
- The combined NIR Raman spectroscopy and multivariate analysis approach minimized fluorescence background.
- Successfully differentiated between viable and nonviable phytoplankton cells across species.
- Identified characteristic spectral shifts in carotenoid bands (1527 and 1158 cm⁻¹) as key indicators of cell death.
Conclusions:
- This combined technique provides a robust method for monitoring phytoplankton viability in situ.
- The approach overcomes previous limitations associated with pigment interference and spectral complexity.
- Spectral changes in carotenoids are reliable biomarkers for phytoplankton cell viability assessment.


