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Updated: Oct 1, 2025

A Reporter Based Cellular Assay for Monitoring Splicing Efficiency
Published on: September 15, 2021
The SpliZ generalizes 'percent spliced in' to reveal regulated splicing at single-cell resolution
Julia Eve Olivieri1,2, Roozbeh Dehghannasiri1,3, Julia Salzman4,5
1Department of Biomedical Data Science, Stanford University, Stanford, CA, USA.
Abstract:
Detecting single-cell-regulated splicing from droplet-based technologies is challenging. Here, we introduce the splicing Z score (SpliZ), an annotation-free statistical method to detect regulated splicing in single-cell RNA sequencing. We applied the SpliZ to human lung cells, discovering hundreds of genes with cell-type-specific splicing patterns including ones with potential implications for basic and translational biology.
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