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Recent Progress in the Research on Benzimidazole PARP-1 Inhibitors
Kaiyue Wu1, Miaojia Chen2, Xiaoyu Peng1
1Institute of Pharmacy and Pharmacology, Hunan Province Cooperative Innovation Center for Molecular Target New Drug Study, College of Pharmacy, Hengyang Medical School, University of South China, Hengyang, Hunan, China.
Abstract:
Poly (ADP-ribose) polymerase-1 (PARP-1) is a multifunctional protein that plays an important role in DNA repair and genome integrity. PARP-1 inhibitors can be used as effective drugs not only to treat BRCA-1/2 deficient cancers because of the synthetic lethality effect but also to treat non- BRCA1/2 deficient tumours because of the effect of PARP capture. Therefore, PARP inhibitors have become a focus of compelling research. Among these inhibitors, substituted benzimidazole derivatives were mainly concerned as lead compounds. However, the commercially available benzimidazole PARP-1 inhibitors have some shortcomings, such as serious toxicity in combination with chemotherapy drugs and in vivo cardiovascular side effects such as anemia. Therefore it is crucial for scientists to explore more structure-activity relationships of the benzimidazole PARP-1 inhibitors and access safer and more effective PARP inhibitors. As the binding regions of PARP-1 and the substrates are usually characterized by NI site and AD site, the modification of benzimidazoles mainly occurs on the benzimidazole skeleton (NI site) and the side chain of benzimidazole in the 2-C position (AD site). Herein, the recent progress in the research on benzamides PARP inhibitors was introduced. We noticed that even though many efforts were made to the modification of NI sites, there was still a lack of optimistic and impressive results. However, the structure-activity relationships of the modification of AD sites have not been thoroughly discovered yet. We hope that enlightened by the previous research, more research on AD sites should be carried out, and more effective benzimidazole PARP-1 inhibitors could be designed, synthesized, and applied to clinics.
Insights
Poly (ADP-ribose) polymerase-1 (PARP-1) inhibitors show promise for cancer treatment. Research focuses on benzimidazole derivatives, but safer, more effective compounds are needed, particularly exploring modifications at the AD site.
Area of Science:
- Medicinal Chemistry
- Molecular Biology
- Oncology
Background:
- Poly (ADP-ribose) polymerase-1 (PARP-1) is crucial for DNA repair and genome integrity.
- PARP-1 inhibitors are effective cancer therapeutics, particularly in BRCA-deficient cancers via synthetic lethality and in other tumors through PARP capture.
- Current benzimidazole PARP-1 inhibitors face challenges including toxicity and cardiovascular side effects.
Purpose of the Study:
- To review recent advancements in benzimidazole-based PARP-1 inhibitors.
- To highlight the need for exploring structure-activity relationships (SAR) for safer and more effective PARP inhibitors.
- To emphasize the potential of modifying the AD site of benzimidazole derivatives.
Main Methods:
- Literature review of recent research on benzimidazole PARP-1 inhibitors.
- Analysis of modifications at the NI and AD sites of benzimidazole scaffolds.
- Evaluation of SAR for PARP-1 inhibitors.
Main Results:
- Significant research efforts have focused on modifying the NI site of benzimidazoles, yielding limited optimal results.
- The SAR of modifications at the AD site of benzimidazole derivatives remains underexplored.
- Current commercially available inhibitors exhibit toxicity and cardiovascular side effects.
Conclusions:
- Further investigation into the SAR of AD site modifications is crucial for designing improved benzimidazole PARP-1 inhibitors.
- Developing safer and more effective PARP inhibitors is essential for clinical application.
- Targeting the AD site offers a promising avenue for future drug discovery in PARP-1 inhibition.
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