Identification of Potential Diagnostic Biomarkers and Biological Pathways in Hypertrophic Cardiomyopathy Based on

Tingyan Yu1, Zhaoxu Huang1, Zhaoxia Pu1

  • 1Department of Cardiology, The Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou 310009, China.

Genes
|March 25, 2022
PubMed

Insights

Hypertrophic cardiomyopathy (HCM) is a genetic heart condition. This study identified LYVE1, MAFB, and MT1M as potential biomarkers for HCM, suggesting roles for oxidative stress and inflammation in its development.

Area of Science:

  • Genetics
  • Cardiology
  • Bioinformatics

Background:

  • Hypertrophic cardiomyopathy (HCM) is a genetic disorder and a leading cause of sudden cardiac death in young individuals.
  • Accurate diagnosis and effective treatment strategies for HCM remain challenging due to its genetic heterogeneity.

Purpose of the Study:

  • To identify potential diagnostic biomarkers for HCM using bioinformatics analysis.
  • To elucidate biological pathways associated with HCM pathogenesis.

Main Methods:

  • Analysis of the GSE36961 dataset to identify differentially expressed genes (DEGs).
  • Weighted gene coexpression network analysis (WGCNA) to identify key gene modules.
  • Least absolute shrinkage and selection operator (LASSO) modeling to pinpoint key genes.
  • Validation of gene expression in the GSE130036 dataset.
  • Gene Set Enrichment Analysis (GSEA) to identify relevant biological pathways.

Main Results:

  • 893 DEGs were identified, with the turquoise module showing a strong negative correlation with HCM.
  • LYVE1, MAFB, and MT1M were identified as key genes associated with HCM.
  • GSEA indicated that oxidative phosphorylation, TNFα-NFκB, IFNγ response, and inflammatory response pathways are potentially linked to HCM.

Conclusions:

  • LYVE1, MAFB, and MT1M are proposed as potential diagnostic biomarkers for HCM.
  • Oxidative stress, immune response, and inflammatory response are likely involved in the pathogenesis of HCM.
  • These findings may aid in the diagnosis and treatment of HCM.

Related Concept Videos

Cardiomyopathy III: Hypertrophic Cardiomyopathy01:29

Cardiomyopathy III: Hypertrophic Cardiomyopathy

Hypertrophic cardiomyopathy, or HCM, is an autosomal dominant genetic disorder characterized by asymmetric left ventricular hypertrophy without ventricular dilation. It is more common in men and is typically diagnosed in young, athletic adults.EtiologyHCM is primarily genetic and is caused by mutations in genes encoding sarcomeric proteins. Researchers have identified over 1400 mutations across at least 11 different genes. Among these, the most frequently occurring mutations are found in the...
76
Blood Studies for Cardiovascular System II: CRP, Hcy, and Cardiac Natriuretic Peptide Markers01:19

Blood Studies for Cardiovascular System II: CRP, Hcy, and Cardiac Natriuretic Peptide Markers

Cardiac biomarkers are critical in diagnosing, prognosing, and managing cardiovascular diseases. Routine measurement of specific biomarkers such as B-type natriuretic peptide (BNP), C-reactive protein (CRP), and homocysteine (Hcy) is common practice in clinical settings to evaluate heart function and predict cardiovascular events.
These markers indicate stress or strain on the heart muscle:
Natriuretic Peptides (BNP)
Cardiac myocytes produce these hormones in response to ventricular stretching...
244
Cardiomyopathy V: Interprofessional Care01:29

Cardiomyopathy V: Interprofessional Care

Managing cardiomyopathy involves addressing underlying or precipitating causes, treating heart failure with medications, and implementing dietary changes and a balanced exercise and rest regimen.Lifestyle ModificationsCardiomyopathy patients should adopt a low-sodium diet to reduce fluid retention and manage heart failure. A personalized exercise and rest plan helps maintain physical fitness without overstraining the heart. Avoiding alcohol and tobacco is essential to prevent further damage to...
52
Blood Studies for Cardiovascular System I: Cardiac Biomarkers01:20

Blood Studies for Cardiovascular System I: Cardiac Biomarkers

Cardiac biomarkers are enzymes, proteins, and hormones released into the blood when cardiac cells are injured. They are powerful tools for triaging.
The essential diagnostic tools for detecting myocardial necrosis and monitoring individuals suspected of having acute coronary syndrome (ACS) include:
Troponins
Troponins, particularly cardiac troponins I and T, are the most precise and sensitive markers of myocardial injury. They are detectable within 4-6 hours of myocardial injury and remain...
382
Pathophysiology of Heart Failure01:17

Pathophysiology of Heart Failure

Heart failure (HF) is a progressive syndrome involving ventricles that leads to inadequate cardiac output. It can be classified based on location and output or ejection fraction. Ejection fraction (EF) is an essential measurement in the diagnosis and surveillance of HF. Reduced EF corresponds to systolic heart failure (HFrEF). However, HF with preserved ejection fraction (HFpEF) is becoming increasingly prevalent. Also known as diastolic HF, this form of HF is related to aging. The...
1.9K
Heart Failure II: Pathophysiology01:29

Heart Failure II: Pathophysiology

Systolic Heart Failure and Compensatory MechanismsSystolic heart failure (also termed HFrEF, Heart Failure with Reduced Ejection Fraction) is the most prevalent type of heart filure. It results in a decreased volume of blood being pumped from the ventricle. The aortic arch and carotid sinuses have baroreceptors that detect reduced blood pressure, triggering the sympathetic nervous system (SNS) to release epinephrine and norepinephrine. Initially, this response aims to boost heart rate and...
82