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Differential Peripheral Blood Glycoprotein Profiles in Symptomatic and Asymptomatic COVID-19
Chad Pickering1, Bo Zhou1, Gege Xu1
1InterVenn Biosciences, South San Francisco, CA 94080, USA.
Viruses
|March 26, 2022
Summary
This study reveals distinct glycoprotein profiles in severe COVID-19 patients, differentiating them from asymptomatic cases and other infections. These glycoproteomic biomarkers show potential for understanding and managing severe infectious diseases.
Area of Science:
- Biochemistry
- Immunology
- Proteomics
Background:
- Glycosylation is a key post-translational modification affecting protein structure and function.
- Understanding differential protein glycosylation in infectious diseases is crucial for diagnosis and treatment.
Purpose of the Study:
- To analyze differential protein glycoisoform distributions in serum from COVID-19 patients and compare them with other conditions.
- To identify specific glycoprotein profiles predictive of symptomatic COVID-19 infection.
Main Methods:
- Liquid chromatography and mass spectrometry for glycopeptide quantification.
- Artificial intelligence for high-throughput data processing.
- Machine learning (LASSO regression, K-means clustering) for predictive modeling.
Main Results:
- Significant differences in 374 out of 597 glycopeptides between symptomatic and asymptomatic COVID-19 patients.
- Overlapping and distinct glycopeptide profiles were observed when comparing COVID-19 with sepsis and common cold infections.
- Machine learning models achieved high accuracy (up to 100%) in predicting symptomatic COVID-19 based on glycoprotein profiles.
Conclusions:
- Glycoprotein alterations in severe COVID-19 are partly a consequence of systemic inflammation but also include COVID-19-specific changes.
- Glycoproteomic biomarkers show potential for biomedical understanding and clinical management of severe acute infections.
- Specific glycoisoform changes may indicate COVID-19-specific consequences or predisposition to severe disease.
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