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Updated: Sep 28, 2025

Setting a Successful Sorting for Extracellular Vesicle Isolation
Published on: October 11, 2024
A new strategy to count and sort neutrophil-derived extracellular vesicles: Validation in infectious disorders
Amandine Bonifay1,2, Stéphane Robert1, Belinda Champagne1
1Aix-Marseille University, C2VN, INSERM 1263, INRA 1260, Marseille, France.
Abstract:
Newly recognized polymorphonuclear neutrophil (PMNs) functions include the ability to release subcellular mediators such as neutrophil-derived extracellular vesicles (NDEVs) involved in immune and thrombo-inflammatory responses. Elevation of their plasmatic level has been reported in a variety of infectious and cardiovascular disorders, but the clinical use of this potential biomarker is hampered by methodological issues. Although flow cytometry (FCM) is currently used to detect NDEVs in the plasma of patients, an extensive characterization of NDEVs has never been done. Moreover, their detection remains challenging because of their small size and low antigen density. Therefore, the objective of the present study was first to establish a surface antigenic signature of NDEVs detectable by FCM and therefore to improve their detection in biological fluids by developing a strategy allowing to overcome their low fluorescent signal and reduce the background noise. By testing a large panel of 54 antibody specificities already reported to be positive on PMNs, we identified a profile of 15 membrane protein markers, including 4 (CD157, CD24, CD65 and CD66c) never described on NDEVs. Among them, CD15, CD66b and CD66c were identified as the most sensitive and specific markers to detect NDEVs by FCM. Using this antigenic signature, we developed a new strategy combining the three best antibodies in a cocktail and reducing the background noise by size exclusion chromatography (SEC). This strategy allowed a significant improvement in NDEVs enumeration in plasma from sepsis patients and made it feasible to efficiently sort NDEVs from COVID-19 patients. Altogether, this work opens the door to a more valuable measurement of NDEVs as a potential biomarker in clinical practice. A similar strategy could also be applied to improve detection by FCM of other rare subpopulations of EVs generated by tissues with limited access, such as vascular endothelium, cancer cells or placenta.
Insights
Neutrophil-derived extracellular vesicles (NDEVs) are key in immune responses. This study identifies new markers and a method to improve NDEV detection for clinical use as biomarkers.
Area of Science:
- Immunology and Cell Biology
- Extracellular Vesicle Research
- Biomarker Development
Background:
- Polymorphonuclear neutrophils (PMNs) release neutrophil-derived extracellular vesicles (NDEVs) involved in immune and thrombo-inflammatory processes.
- Elevated NDEV levels are linked to infectious and cardiovascular diseases, but clinical application is limited by detection challenges.
- Current flow cytometry (FCM) methods for NDEV detection in plasma are hampered by small vesicle size and low antigen density.
Purpose of the Study:
- To establish a surface antigenic signature of NDEVs for FCM detection.
- To develop a strategy to enhance NDEV detection in biological fluids by overcoming low fluorescent signals and reducing background noise.
- To improve the clinical utility of NDEVs as potential biomarkers.
Main Methods:
- Screened 54 antibody specificities on PMNs to identify NDEV surface markers.
- Developed a detection strategy using a cocktail of highly sensitive and specific antibodies (CD15, CD66b, CD66c) combined with size exclusion chromatography (SEC).
- Applied the strategy to enumerate NDEVs in plasma from sepsis patients and sort NDEVs from COVID-19 patients.
Main Results:
- Identified a profile of 15 membrane protein markers on NDEVs, including four novel markers (CD157, CD24, CD65, CD66c).
- CD15, CD66b, and CD66c were determined to be the most sensitive and specific markers for NDEV detection by FCM.
- The developed strategy significantly improved NDEV enumeration in sepsis patients and enabled efficient sorting of NDEVs from COVID-19 patients.
Conclusions:
- This work establishes a robust antigenic signature and detection strategy for NDEVs using FCM.
- The improved detection method holds promise for the valuable measurement of NDEVs as clinical biomarkers.
- The strategy can be adapted for detecting other rare extracellular vesicle subpopulations from challenging biological sources.

