Artificial neural networks for solution scattering data analysis
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Updated: Sep 27, 2025

Analysis of SEC-SAXS data via EFA deconvolution and Scatter
Published on: January 28, 2021
Dmitry S Molodenskiy1, Dmitri I Svergun1, Alexey G Kikhney1
1European Molecular Biology Laboratory, Hamburg Site, EMBL c/o DESY, Notkestrasse 85, 22607 Hamburg, Germany.
Abstract:
Small-angle X-ray scattering (SAXS) experiments are widely used for the characterization of biological macromolecules in solution. SAXS patterns contain information on the size and shape of dissolved particles in nanometer resolution. Here we propose a method for primary SAXS data analysis based on the application of artificial neural networks (NNs). Trained on synthetic SAXS data, the feedforward NNs are able to reliably predict molecular weight and maximum intraparticle distance (Dmax) directly from the experimental data. The method is applicable to data from monodisperse solutions of folded proteins, intrinsically disordered proteins, and nucleic acids. Extensive tests on synthetic SAXS data generated in various angular ranges with varying levels of noise demonstrated a higher accuracy and better robustness of the NN approach compared to the existing methods.

