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A User's Guide to Generalized Integrate-and-Fire Models
Emerson F Harkin1, Jean-Claude Béïque1, Richard Naud2
1University of Ottawa, Center for Neural Dynamics, Ottawa, ON, Canada.
Abstract:
The generalized integrate-and-fire (GIF) neuron model accounts for some of the most fundamental behaviours of neurons within a compact and extensible mathematical framework. Here, we introduce the main concepts behind the design of the GIF model in terms that will be familiar to electrophysiologists, and show why its simple design makes this model particularly well suited to mimicking behaviours observed in experimental data. Along the way, we will build an intuition for how specific neuronal behaviours, such as spike-frequency adaptation, or electrical properties, such as ionic currents, can be formulated mathematically and used to extend integrate-and-fire models to overcome their limitations. This chapter will provide readers with no previous exposure to modelling a clear understanding of the strengths and limitations of GIF models, along with the mathematical intuitions required to digest more detailed and technical treatments of this topic.
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