Related Experiment Video
Updated: Sep 25, 2025

Easy Measurement of Diffusion Coefficients of EGFP-tagged Plasma Membrane Proteins Using k-Space Image Correlation Spectroscopy
Published on: May 10, 2014
[Evaluation of Diffusional Kurtosis Inference Using Synthetic q-space Learning and Bias Correction]
Koh Sasaki1,2, Yoshitaka Masutani1, Keisuke Kinoshita2
1Department of Biomedical Information Sciences, Graduate School of Information Sciences, Hiroshima City University.
Purpose:
In synthetic q-space learning (synQSL), which uses deep learning to infer the diffusional kurtosis (K), a bias that depends on the noise level added to the synthetic training data occurs. The purpose of this study was to evaluate K inference using synQSL and bias correction.
Methods:
Using the synthetic test data and the real image data, K was inferred by synQSL, and bias correction was performed. Then, those results were compared with K inferred by fitting by the least-squares fitting (LSF) method. At this time, the noise level of the training data was set to 3 types, the noise level of the synthesis test data was set to 5 types, and the number of excitation (NEX) of the real image data was set to 4 types. Robustness of inference was evaluated by the outlier rate, which is the ratio of K outliers to the whole brain. We also evaluated the root mean square error (RMSE) of the inferred K.
Results:
The outlier rate inferred by synQSL without correction was significantly lower in the test data of each noise level than that by the LSF method and was further reduced by correction. In addition, the RMSE of NEX 1 with NEX 4 as the correct answer based on the real image data had the smallest correction result of K by synQSL.
Conclusion:
Inferring K using synQSL and bias correction is a robust and small error method compared to that using the LSF method.
Related Concept Videos
Detection of Gross Error: The Q Test
One-Compartment Open Model: Wagner-Nelson and Loo Riegelman Method for ka Estimation
On...
Modified Boxplots
However, the box plot does not tell the reader about outliers - values that lie far from the center of the data. We can modify the standard box and whisker plot to identify the outliers and visualize the actual spread of the data in a sample.
Initially, we calculate the adjusted...
Linear Approximation in Frequency Domain
In contrast, nonlinear systems do not inherently possess these properties. However, for small deviations around an operating point, a nonlinear system can often be approximated as linear....
Calibration Curves: Linear Least Squares
For data that follow a straight line, the standard method for fitting is the linear...
Linear Approximation in Time Domain
For a simple pendulum with a mass evenly distributed along its length and the center of mass located at half the pendulum's length,...

