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Published on: December 11, 2012
Molecular basis of antibiotic self-resistance in a bee larvae pathogen
Tam Dang1, Bernhard Loll2, Sebastian Müller1
1Institut für Chemie, Technische Universität Berlin, Berlin, Germany.
Abstract:
Paenibacillus larvae, the causative agent of the devastating honey-bee disease American Foulbrood, produces the cationic polyketide-peptide hybrid paenilamicin that displays antibacterial and antifungal activity. Its biosynthetic gene cluster contains a gene coding for the N-acetyltransferase PamZ. We show that PamZ acts as self-resistance factor in Paenibacillus larvae by deactivation of paenilamicin. Using tandem mass spectrometry, nuclear magnetic resonance spectroscopy and synthetic diastereomers, we identified the N-terminal amino group of the agmatinamic acid as the N-acetylation site. These findings highlight the pharmacophore region of paenilamicin, which we very recently identified as a ribosome inhibitor. Here, we further determined the crystal structure of PamZ:acetyl-CoA complex at 1.34 Å resolution. An unusual tandem-domain architecture provides a well-defined substrate-binding groove decorated with negatively-charged residues to specifically attract the cationic paenilamicin. Our results will help to understand the mode of action of paenilamicin and its role in pathogenicity of Paenibacillus larvae to fight American Foulbrood.
Insights
The enzyme PamZ protects Paenibacillus larvae from its own antibiotic, paenilamicin, by acetylation. This mechanism is crucial for understanding the bacterium
Area of Science:
- Microbiology
- Biochemistry
- Structural Biology
Background:
- Paenibacillus larvae causes American Foulbrood, a severe honey bee disease.
- The bacterium produces paenilamicin, a potent antibiotic with antibacterial and antifungal properties.
- Paenilamicin's biosynthetic gene cluster includes the N-acetyltransferase gene, pamZ.
Purpose of the Study:
- To investigate the function of PamZ in Paenibacillus larvae.
- To elucidate the mechanism by which Paenibacillus larvae achieves self-resistance to paenilamicin.
- To characterize the structural and biochemical properties of PamZ.
Main Methods:
- Tandem mass spectrometry
- Nuclear magnetic resonance spectroscopy
- X-ray crystallography
- Enzymatic assays
Main Results:
- PamZ deactivates paenilamicin through N-acetylation of agmatinamic acid.
- The crystal structure of PamZ:acetyl-CoA complex revealed a unique tandem-domain architecture.
- A negatively-charged substrate-binding groove specifically binds cationic paenilamicin.
- Identified the N-terminal amino group of agmatinamic acid as the N-acetylation site.
Conclusions:
- PamZ functions as a self-resistance factor in Paenibacillus larvae.
- Understanding PamZ-mediated deactivation is key to paenilamicin's role in pathogenicity.
- Structural insights into PamZ aid in comprehending antibiotic resistance mechanisms.
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