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Defining Levels of Automated Chemical Design
Brian Goldman1, Steven Kearnes1, Trevor Kramer1
1Relay Therapeutics, 399 Binney Street, Cambridge, Massachusetts 02139, United States.
Journal of Medicinal Chemistry
|May 5, 2022
Summary
Automated Chemical Design (ACD) Levels standardize terminology for computational drug discovery. This framework clarifies system autonomy in designing small molecules, aiding medicinal chemists in evaluation.
Area of Science:
- Computational chemistry
- Medicinal chemistry
- Drug discovery
Background:
- Computational methods are increasingly used for automated small molecule design in drug discovery.
- Existing literature lacks standardized terminology and key attributes to differentiate these automated design systems.
- This ambiguity hinders clear understanding and evaluation of various computational approaches.
Purpose of the Study:
- To introduce a novel framework, Automated Chemical Design (ACD) Levels, for classifying automated small molecule design systems.
- To define system autonomy based on ideation and decision-making capabilities.
- To provide a common language for the field of computational drug discovery.
Main Methods:
- Development of the Automated Chemical Design (ACD) Levels framework.
- Analysis of existing literature to identify and categorize automated small molecule design systems.
- Illustration of the framework using literature exemplars and notable methods.
Main Results:
- The proposed ACD Levels framework clearly defines the autonomy of automated chemical design systems.
- The framework categorizes various notable methods and applications within its defined levels.
- A common language is established for describing automated small molecule design systems.
Conclusions:
- The ACD Levels provide a standardized approach to classifying automated small molecule design systems.
- This framework enhances clarity and facilitates better understanding and evaluation for medicinal chemists.
- Adoption of ACD Levels will advance the field of computational drug discovery through consistent terminology.
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