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Proofreading and DNA Repair Assay Using Single Nucleotide Extension and MALDI-TOF Mass Spectrometry Analysis
Published on: June 19, 2018
Human TREX1 Repairs 3'-End DNA Lesions in Vitro
Kun Yang1, Xiaoying Wei1,2, Jennifer Le1
1Division of Chemical Biology and Medicinal Chemistry, College of Pharmacy, The University of Texas at Austin, Austin, Texas 78712, United States.
Human three-prime repair exonuclease 1 (TREX1) removes DNA damage in the nucleus. This DNA repair enzyme excises toxic intermediates, preventing autoimmune responses and DNA damage.
Area of Science:
- Molecular Biology
- DNA Repair Mechanisms
- Immunology
Background:
- Human three-prime repair exonuclease 1 (TREX1) is a key 3' to 5' exonuclease.
- TREX1 degrades cytosolic DNA to prevent autoimmune responses.
- Nuclear localization and function of TREX1 under genotoxic stress are not fully understood.
Purpose of the Study:
- To investigate the in vitro enzymatic activity of nuclear TREX1.
- To determine TREX1's role in processing DNA repair intermediates.
Main Methods:
- In vitro enzymatic assays.
- Biochemical characterization of TREX1 activity.
Main Results:
- TREX1 efficiently excises 3'-phospho-α,β-unsaturated aldehyde.
- TREX1 also excises 3'-deoxyribose phosphate.
- These substrates are common in base excision repair and from nonenzymatic strand incision at abasic sites.
Conclusions:
- TREX1 possesses nuclear exonuclease activity.
- TREX1 processes key DNA repair intermediates in vitro.
- This suggests a role for nuclear TREX1 in maintaining genome stability and preventing autoimmunity.
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