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Related Concept Videos

Conservative Site-specific Recombination and Phase Variation02:53

Conservative Site-specific Recombination and Phase Variation

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Because the DNA segments are cut and reorganized in a direction-specific manner, site-specific recombination has emerged as an efficient genetic engineering technique. Flippase and Cyclization recombinases or Flp and Cre, respectively, are two members of the tyrosine recombinase family derived from bacteriophages, that are used to mediate site-specific DNA insertions, deletions, and targeted expression of proteins in mammalian cell lines.
The recognition sites for Cre recombinase called LoxP...
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In-vitro Mutagenesis01:16

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To learn more about the function of a gene, researchers can observe what happens when the gene is inactivated or “knocked out,” by creating genetically engineered knockout animals. Knockout mice have been particularly useful as models for human diseases such as cancer, Parkinson’s disease, and diabetes.
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Exon Recombination02:32

Exon Recombination

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The evolution of new genes is critical for speciation. Exon recombination, also known as exon shuffling or domain shuffling, is an important means of new gene formation. It is observed across vertebrates, invertebrates, and in some plants such as potatoes and sunflowers. During exon recombination, exons from the same or different genes recombine and produce new exon-intron combinations, which might evolve into new genes. 
Exon shuffling follows “splice frame rules.” Each exon...
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Reporter Genes02:11

Reporter Genes

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Reporter genes are a type of protein-coding gene that are often tagged to a gene of interest. Once inside a target cell, reporter genes usually produce visually identifiable characteristics like fluorescence and luminescence when expressed along with the gene of interest. Thus, reporter genes “report” the presence or absence of genes of interest in an organism, determine the gene expression pattern, or track the physical location of a DNA segment or protein in the cell.
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Related Experiment Video

Updated: Sep 23, 2025

Defining Gene Functions in Tumorigenesis by Ex vivo Ablation of Floxed Alleles in Malignant Peripheral Nerve Sheath Tumor Cells
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Defining Gene Functions in Tumorigenesis by Ex vivo Ablation of Floxed Alleles in Malignant Peripheral Nerve Sheath Tumor Cells

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Retooling conditional gene expression using a floxed exon.

Mary B Kroetz1

  • 1Bellarmine University, Louisville, KY, USA.

Trends in Genetics : TIG
|May 15, 2022
PubMed
Summary

Shaffer and Greenwald adapted the Cre-lox system for precise gene control. Their method uses a floxed exon to trigger premature translation termination and mRNA decay, enabling conditional gene regulation.

Area of Science:

  • Molecular Biology
  • Genetics
  • Gene Regulation

Background:

  • The Cre-lox system is a widely used tool for controlling gene expression in a spatiotemporal manner.
  • Existing methods may have limitations in achieving robust and precise conditional gene regulation.

Purpose of the Study:

  • To develop an improved Cre-lox based system for conditional gene expression.
  • To enable robust regulation of both transgenes and endogenous genes.

Main Methods:

  • Adaptation of the Cre-lox recombination system.
  • Introduction of a 'floxed' artificial exon designed to induce premature translation termination.
  • Leveraging nonsense-mediated decay (NMD) of mRNA.

Main Results:

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Subcloning Plus Insertion SPI - A Novel Recombineering Method for the Rapid Construction of Gene Targeting Vectors
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Last Updated: Sep 23, 2025

Defining Gene Functions in Tumorigenesis by Ex vivo Ablation of Floxed Alleles in Malignant Peripheral Nerve Sheath Tumor Cells
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Stereotaxic Injection of a Viral Vector for Conditional Gene Manipulation in the Mouse Spinal Cord
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Subcloning Plus Insertion SPI - A Novel Recombineering Method for the Rapid Construction of Gene Targeting Vectors
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  • The engineered system effectively promotes premature translation termination.
  • Nonsense-mediated decay of mRNA is triggered, leading to reduced gene product levels.
  • Robust conditional regulation of target genes was achieved.

Conclusions:

  • The novel Cre-lox adaptation offers a powerful strategy for conditional gene expression.
  • This system provides enhanced control over transgenes and endogenous loci.
  • The approach facilitates precise manipulation of gene activity in biological research.