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Aptamer-based Cas14a1 biosensor for amplification-free live pathogenic detection.

Yangdao Wei1, Zhenzhen Tao1, Lu Wan1

  • 1State Key Laboratory of Marine Resource Utilization in South China Sea, School of Pharmaceutical Sciences, Hainan University, Haikou, 570228, China.

Biosensors & Bioelectronics
|May 21, 2022
PubMed
Summary
This summary is machine-generated.

A new Aptamer-based Cas14a1 Biosensor (ACasB) detects live Staphylococcus aureus (S. aureus) without nucleic acid amplification. This highly sensitive and specific biosensor offers rapid on-site detection for food safety and environmental monitoring.

Keywords:
Bacteria diagnosticCRISPR-CasStaphylococcus aureus

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Area of Science:

  • Microbiology
  • Biotechnology
  • Biosensor Technology

Background:

  • CRISPR-Cas systems offer versatile pathogen detection via guide RNA modification.
  • Current CRISPR-based methods often require nucleic acid extraction and amplification, limiting rapid detection.
  • Sensitive detection of live Staphylococcus aureus (S. aureus) is crucial for food safety and environmental monitoring.

Purpose of the Study:

  • To develop a novel biosensor for the specific and sensitive detection of live S. aureus.
  • To create a platform that bypasses the need for nucleic acid extraction and amplification.
  • To establish an on-site detection method for S. aureus applicable in food safety and environmental contexts.

Main Methods:

  • Development of an Aptamer-based Cas14a1 Biosensor (ACasB).
  • Utilized an S. aureus-specific aptamer hybridized with a blocker DNA.
  • Detection mechanism based on aptamer-S. aureus binding, blocker release, and subsequent Cas14a1 activation leading to a fluorescent signal.
  • Cas14a1 protein activation by the released blocker binding to sgRNA.

Main Results:

  • The ACasB demonstrated high specificity and sensitivity, detecting as low as 400 CFU/ml of live S. aureus.
  • Achieved 100% accuracy in detecting S. aureus in complex samples, comparable to qPCR.
  • The biosensor functions without requiring nucleic acid extraction or amplification.

Conclusions:

  • The ACasB provides a sensitive and specific method for detecting live S. aureus.
  • This aptamer-based Cas14a1 biosensor eliminates the need for nucleic acid amplification, enabling rapid on-site detection.
  • The ACasB holds significant potential for applications in food safety and environmental monitoring.