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Updated: Sep 21, 2025

Derivatization of Protein Crystals with I3C using Random Microseed Matrix Screening
Published on: January 16, 2021
Single-support serial isomorphous replacement phasing
Nicolas Foos1, Mahmoud Rizk1, Max H Nanao1
1Structural Biology, European Synchrotron Radiation Facility, 71 Avenue des Martyrs, 38000 Grenoble, France.
Abstract:
The use of single isomorphous replacement (SIR) has become less widespread due to difficulties in sample preparation and the identification of isomorphous native and derivative data sets. Non-isomorphism becomes even more problematic in serial experiments, because it adds natural inter-crystal non-isomorphism to heavy-atom-soaking-induced non-isomorphism. Here, a method that can successfully address these issues (and indeed can benefit from differences in heavy-atom occupancy) and additionally significantly simplifies the SIR experiment is presented. A single heavy-atom soak into a microcrystalline slurry is performed, followed by automated serial data collection of partial data sets. This produces a set of data collections with a gradient of heavy-atom occupancies, which are reflected in differential merging statistics. These differences can be exploited by an optimized genetic algorithm to segregate the pool of data sets into `native' and `derivative' groups, which can then be used to successfully determine phases experimentally by SIR.
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