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Inference on high-dimensional implicit dynamic models using a guided intermediate resampling filter.

Joonha Park1, Edward L Ionides2

  • 1Boston University, Boston, USA.

Statistics and Computing
|June 6, 2022
PubMed
Summary
This summary is machine-generated.

We developed a novel particle filter method for complex, partially observed Markov process models. This approach enhances scalability for high-dimensional, nonlinear systems with intractable transition densities.

Keywords:
curse of dimensionalityimplicit modelsparticle filterplug-and-play propertysequential Monte Carlospatiotemporal inference

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Area of Science:

  • Statistics
  • Computational Science
  • Dynamical Systems

Background:

  • Markov process models with intractable transition densities are common in implicitly defined models.
  • Existing particle filter methods struggle with the curse of dimensionality in nonlinear, non-Gaussian models.
  • Ensemble Kalman filter methods offer scalability but are unsuitable for highly nonlinear or non-Gaussian dynamics.

Purpose of the Study:

  • To propose a scalable particle filter method for inference on moderately high-dimensional, nonlinear, non-Gaussian, partially observed Markov process models.
  • To address the challenge of analytically intractable transition densities in such models.
  • To enable likelihood-based inference for complex spatiotemporal systems.

Main Methods:

  • Developed a particle filter method that propagates particles at intermediate time intervals and resamples based on forecast likelihood.
  • Assumes a continuous-time latent process with an available simulator.
  • Combined the particle filter with parameter estimation for likelihood-based inference.

Main Results:

  • The proposed method demonstrates improved practical and theoretical scalability with respect to model dimension.
  • Successfully applied the methodology to a stochastic Lorenz 96 model.
  • Validated the approach on a population dynamics model for infectious diseases in a linked network.

Conclusions:

  • The novel particle filter method offers a scalable solution for inference in complex, implicitly defined Markov process models.
  • This approach is particularly valuable for nonlinear, non-Gaussian, and high-dimensional systems where traditional methods fail.
  • The demonstrated applications highlight the method's utility in fields like climate modeling and epidemiology.