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Updated: Sep 20, 2025

Fluorescence-Based Detection of FEN1 Nuclease Activity and Screening of Small-Molecule Inhibitors
Published on: June 27, 2025
A ferrocene-containing nucleoside analogue targets DNA replication in pancreatic cancer cells
Marium Rana1,2, Alessio Perotti1, Lucy M Bisset1
1School of Biosciences, The University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.
Abstract:
Pancreatic ductal adenocarcinoma (PDAC) is a disease that remains refractory to existing treatments including the nucleoside analogue gemcitabine. In the current study we demonstrate that an organometallic nucleoside analogue, the ferronucleoside 1-(S,Rp), is cytotoxic in a panel of PDAC cell lines including gemcitabine-resistant MIAPaCa2, with IC50 values comparable to cisplatin. Biochemical studies show that the mechanism of action is inhibition of DNA replication, S-phase cell cycle arrest and stalling of DNA-replication forks, which were directly observed at single molecule resolution by DNA-fibre fluorography. In agreement with this, transcriptional changes following treatment with 1-(S,Rp) include activation of three of the four genes (HUS1, RAD1, RAD17) of the 9-1-1 check point complex clamp and two of the three genes (MRE11, NBN) that form the MRN complex as well as activation of multiple downstream targets. Furthermore, there was evidence of phosphorylation of checkpoint kinases 1 and 2 as well as RPA1 and gamma H2AX, all of which are considered biochemical markers of replication stress. Studies in p53-deficient cell lines showed activation of CDKN1A (p21) and GADD45A by 1-(S,Rp) was at least partially independent of p53. In conclusion, because of its potency and activity in gemcitabine-resistant cells, 1-(S,Rp) is a promising candidate molecule for development of new treatments for PDAC.
Insights
A novel ferronucleoside, 1-(S,Rp), shows potent anti-cancer activity against pancreatic ductal adenocarcinoma (PDAC) cells, including gemcitabine-resistant types. This organometallic compound inhibits DNA replication and induces cell cycle arrest, offering a promising new therapeutic avenue for PDAC.
Area of Science:
- Oncology
- Medicinal Chemistry
- Molecular Biology
Background:
- Pancreatic ductal adenocarcinoma (PDAC) is a lethal cancer with limited treatment options.
- Existing therapies, such as gemcitabine, often face resistance, necessitating novel therapeutic strategies.
Purpose of the Study:
- To evaluate the efficacy and mechanism of action of a novel organometallic nucleoside analogue, ferronucleoside 1-(S,Rp), against PDAC cells.
- To assess the potential of 1-(S,Rp) as a treatment for gemcitabine-resistant PDAC.
Main Methods:
- Cytotoxicity assays were performed on a panel of PDAC cell lines, including gemcitabine-resistant variants.
- Mechanistic studies involved DNA-fibre fluorography, cell cycle analysis, and assessment of DNA damage response markers.
- Transcriptional profiling and Western blotting were used to analyze cellular responses to treatment.
Main Results:
- Ferronucleoside 1-(S,Rp) demonstrated significant cytotoxicity against PDAC cell lines, with IC50 values comparable to cisplatin.
- The compound inhibited DNA replication, induced S-phase arrest, and stalled replication forks, as visualized by DNA-fibre fluorography.
- Treatment led to the activation of DNA damage response pathways, including checkpoint complexes and replication stress markers, partly independent of p53.
Conclusions:
- Ferronucleoside 1-(S,Rp) exhibits potent anti-cancer activity in PDAC, including gemcitabine-resistant models.
- Its mechanism involves the inhibition of DNA replication and induction of replication stress.
- 1-(S,Rp) represents a promising candidate for the development of novel PDAC therapies.
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