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Updated: Sep 8, 2025

In Vitro Differentiation of Human Pluripotent Stem Cells into Trophoblastic Cells
Published on: March 16, 2017
Integrated multi-omics reveal polycomb repressive complex 2 restricts human trophoblast induction
Dick W Zijlmans1, Irene Talon2, Sigrid Verhelst3
1Department of Molecular Biology, Faculty of Science, Radboud Institute for Molecular Life Sciences (RIMLS), Oncode Institute, Radboud University Nijmegen, Nijmegen, The Netherlands.
Human naive pluripotent stem cells possess chromatin barriers, contrary to previous assumptions. Polycomb repressive complex 2 (PRC2) restricts trophoblast differentiation, revealing epigenetic restrictions in these cells.
Area of Science:
- Stem cell biology
- Epigenetics
- Developmental biology
Background:
- Human naive pluripotent stem cells are believed to have unrestricted lineage potential due to a lack of chromatin-based barriers.
- This assumption, however, has not been experimentally verified, leaving a gap in understanding their epigenetic regulation.
Purpose of the Study:
- To investigate the chromatin landscape and epigenetic state of human naive and primed pluripotent stem cells.
- To determine if chromatin-based lineage barriers exist in naive pluripotent stem cells and identify the underlying molecular mechanisms.
Main Methods:
- Comparative analysis of the chromatin-associated proteome, histone modifications (including H3K27me3), and transcriptomes between naive and primed human pluripotent stem cells.
- Functional assays involving Polycomb repressive complex 2 (PRC2) inhibition to assess its role in lineage restriction.
- Analysis of human blastoids to evaluate the impact of PRC2 activity on trophoblast differentiation and development.
Main Results:
- Integrated analysis revealed significant differences in chromatin modules between naive and primed stem cells.
- A notable enrichment of Polycomb repressive complex 2 (PRC2)-associated H3K27me3 was identified in naive pluripotent stem cells, particularly at promoters of lineage-determining genes.
- PRC2 activity was confirmed as a chromatin barrier restricting trophoblast lineage differentiation; its inhibition promoted trophoblast fate and blastoid cavity formation.
Conclusions:
- Human naive pluripotent stem cells are not epigenetically unrestricted as previously thought.
- Chromatin mechanisms, specifically PRC2-mediated H3K27 trimethylation, actively oppose the induction of alternative cell fates, such as trophoblast differentiation.
- These findings redefine the epigenetic landscape of naive pluripotency and have implications for stem cell differentiation protocols and developmental studies.
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