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Updated: Sep 7, 2025

Assays for Validating Histone Acetyltransferase Inhibitors
Published on: August 6, 2020
Evidence that HDAC7 acts as an epigenetic "reader" of AR acetylation through NCoR-HDAC3 dissociation
Yuchen Zhang1, Rafael Andrade1, Anthony A Hanna1
1Department of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, MI 48202, USA.
Abstract:
Histone deacetylase (HDAC) proteins are epigenetic regulators that govern a wide variety of cellular events. With a role in cancer formation, HDAC inhibitors have emerged as anti-cancer therapeutics. Among the eleven metal-dependent class I, II, and IV HDAC proteins targeted by inhibitor drugs, class IIa HDAC4, -5, -7, and -9 harbor low deacetylase activity and are hypothesized to be "reader" proteins, which bind to post-translationally acetylated lysine. However, evidence linking acetyllysine binding to a downstream functional event is lacking. Here, we report for the first time that HDAC4, -5, and -7 dissociated from corepressor NCoR in the presence of an acetyllysine-containing peptide, consistent with reader function. Documenting the biological consequences of this possible reader function, mutation of a critical acetylation site regulated androgen receptor (AR) transcriptional activation function through HDAC7-NCoR-HDAC3 dissociation. The data document the first evidence consistent with epigenetic-reader functions of class IIa HDAC proteins.
Insights
Class IIa histone deacetylases (HDACs) may function as epigenetic readers. We show HDAC4, -5, and -7 bind acetyllysine peptides and regulate androgen receptor activity, providing the first evidence for this function.
Area of Science:
- Epigenetics
- Molecular Biology
- Cancer Biology
Background:
- Histone deacetylases (HDACs) are epigenetic regulators implicated in cancer.
- Class IIa HDACs (HDAC4, -5, -7, -9) have low catalytic activity and are proposed to be "reader" proteins.
- The functional consequences of class IIa HDACs acting as readers remain unclear.
Purpose of the Study:
- To investigate the potential "reader" function of class IIa HDACs.
- To determine if acetyllysine binding by class IIa HDACs has downstream functional effects.
- To explore the role of class IIa HDACs in regulating transcriptional activation.
Main Methods:
- In vitro assays using acetyllysine-containing peptides.
- Co-immunoprecipitation to assess protein interactions.
- Site-directed mutagenesis of acetylation sites.
- Analysis of androgen receptor (AR) transcriptional activity.
Main Results:
- HDAC4, -5, and -7 dissociated from the NCoR corepressor complex upon binding to an acetyllysine peptide.
- Mutation of a key acetylation site in HDAC7 disrupted the HDAC7-NCoR-HDAC3 complex.
- This disruption altered androgen receptor transcriptional activation, demonstrating a functional consequence.
Conclusions:
- This study provides the first evidence supporting the epigenetic "reader" function of class IIa HDAC proteins.
- Class IIa HDACs' interaction with acetylated proteins influences transcriptional regulation.
- These findings offer new insights into HDAC function and potential therapeutic targets in epigenetic regulation.
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